RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CSTF2P33240 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 BMPR1AP36894 532 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 CCT3P49368 545 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 VEGFBP49765 207 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 MLC1Q15049 377 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 SEC23BQ15437 767 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 GDPGP1Q6ZNW5 385 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 NUDT13Q86X67 352 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 IL17RCQ8NAC3 791 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 OR8J1Q8NGP2 316 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 ROGDIQ9GZN7 287 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 NUAK2Q9H093 628 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 DEC1Q9P2X7 70 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 SLC23A2Q9UGH3 650 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 ADAM29Q9UKF5 820 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 ITGB1BP2Q9UKP3 347 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 WDR37Q9Y2I8 494 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 TCF20Q9UGU0 1960 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 MN1Q10571 1320 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 A0A075B6Q4 140 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 FAM227AF5H4B4 570 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 H7BY64 318 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 B4GALT2O60909 372 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC6A11P48066 632 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 HSPB3Q12988 150 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 LRRC26Q2I0M4 334 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 RNLSQ5VYX0 342 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 CASP12Q6UXS9 341 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 PLA2G15Q8NCC3 412 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SPPL3Q8TCT6 385 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 CXorf40AQ8TE69 158 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 HTRA1Q92743 480 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 TMEM80Q96HE8 168 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 PRAP1Q96NZ9 151 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 TREX2Q9BQ50 279 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 POLR2J3Q9H1A7 115 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 LHX9Q9NQ69 397 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 CUEDC1Q9NWM3 386 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SEC14L3Q9UDX4 400 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 RPL36Q9Y3U8 105 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 PCDHGB6Q9Y5F9 930 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 DNMT3AQ9Y6K1 912 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SLITRK5O94991 958 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 XKP51811 444 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SSX1Q16384 188 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 C12orf73Q69YU5 71 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 CCDC190Q86UF4 302 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 LRRTM4Q86VH4 590 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 HEATR4Q86WZ0 1026 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 MENTQ9BUN1 341 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 KLHL25Q9H0H3 589 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 TMEM245Q9H330 911 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 DDX31Q9H8H2 851 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SIAEQ9HAT2 523 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 C11orf16Q9NQ32 467 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 SACM1LQ9NTJ5 587 aa15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 GPC6Q9Y625 555 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-202ENST00000535997 ANHXE9PGG2 379 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 LOC110117498-PIK3R3F6TDL0 507 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 H3BN98 237 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 TRA2BP62995 288 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 REEP5Q00765 189 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 COX10Q12887 443 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 SPHARQ15513 63 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 ZNF697Q5TEC3 545 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 ZNF513Q8N8E2 541 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 FAM83FQ8NEG4 500 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 PIK3R3Q92569 461 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 RAB7BQ96AH8 199 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 EXOSC8Q96B26 276 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 TXNDC15Q96J42 360 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 OPALINQ96PE5 141 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 FUZQ9BT04 418 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 C3orf14Q9HBI5 128 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 SEMA3GQ9NS98 782 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 C5AR2Q9P296 337 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 CRNNQ9UBG3 495 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 NUMA1Q14980 2115 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 FEZF1A0PJY2 475 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 TMPRSS11DO60235 418 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 GPX5O75715 221 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 DNTTP04053 509 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 ALOX12P18054 663 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 CD72P21854 359 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 GTF2E2P29084 291 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 DGKEP52429 567 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 ZNF234Q14588 700 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 OCLNQ16625 522 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 PGBD2Q6P3X8 592 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 DEF8Q6ZN54 512 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 TRIM69Q86WT6 500 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 KRT73Q86Y46 540 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 RBM45Q8IUH3 476 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 TBC1D19Q8N5T2 526 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 FLCNQ8NFG4 579 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC7A13Q8TCU3 470 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 RSPRY1Q96DX4 576 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 HDAC8Q9BY41 377 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 HHATLQ9HCP6 504 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms