RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	IGDCC3	Q8IVU1	814 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	RPRML	Q8N4K4	120 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	NKAP	Q8N5F7	415 aa	Known RBP	10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	MORN4	Q8NDC4	146 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	C7orf57	Q8NEG2	295 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	CDKL2	Q92772	493 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	SGCZ	Q96LD1	299 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	ARPC5L	Q9BPX5	153 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM173A	Q9BQD7	235 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	TTYH2	Q9BSA4	534 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	SPATA9	Q9BWV2	254 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	EHD1	Q9H4M9	534 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	HPF1	Q9NWY4	346 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	TBK1	Q9UHD2	729 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	MRPS33	Q9Y291	106 aa	Known RBP	10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	OARD1	Q9Y530	152 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	ITPR3	Q14573	2671 aa		10.7	□□□□□ -0.7
CTNND1-238	ENST00000534647	HCFC1	P51610	2035 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	IQANK1	A0A1B0GTG1	560 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PINLYP	A6NC86	204 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	FIGNL2	A6NMB9	653 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	SIAH2	O43255	324 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	AKAP10	O43572	662 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	B3GALT2	O43825	422 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	OR6B1	O95007	311 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	TBX6	O95947	436 aa	Predicted RBP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	INHBA	P08476	426 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	KRT15	P19012	456 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	HNRNPH1	P31943	449 aa	Known RBP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLC6A12	P48065	614 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	NR0B1	P51843	470 aa	Known RBP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	ART1	P52961	327 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PGGT1B	P53609	377 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLC13A2	Q13183	592 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	RCN2	Q14257	317 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	EFTUD2	Q15029	972 aa	Known RBP eCLIP	10.69	□□□□□ -0.7	3e-8	■■□□□ 13.7
CTNND1-238	ENST00000534647	RASA2	Q15283	850 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	LGSN	Q5TDP6	509 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	STEAP4	Q687X5	459 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	HSDL2	Q6YN16	418 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	REC114	Q7Z4M0	266 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	TMPRSS11B	Q86T26	416 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	CTAGE3P	Q8IX95	158 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	TMEM52	Q8NDY8	209 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	OR2L5	Q8NG80	312 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	ASB15	Q8WXK1	588 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	DAZL	Q92904	295 aa	Known RBP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	KIAA1191	Q96A73	305 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	RASL10B	Q96S79	203 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	SERINC2	Q96SA4	455 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PAFAH2	Q99487	392 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	FOXC2	Q99958	501 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	WDR83	Q9BRX9	315 aa	Known RBP	10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	TTTY12	Q9BZ98	90 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	IL1RL2	Q9HB29	575 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PNPLA3	Q9NST1	481 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PSD3	Q9NYI0	1048 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	GPRC5B	Q9NZH0	403 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	SENP1	Q9P0U3	644 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	DAPP1	Q9UN19	280 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	PCDHGB3	Q9Y5G1	929 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	ACTL7B	Q9Y614	415 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	CLCA3P	Q9Y6N3	262 aa		10.69	□□□□□ -0.7
CTNND1-238	ENST00000534647	TCRBV9S1A1T	A0A576	114 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM90A27P	A6NNH2	459 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM47E-STBD1	D6RA91	191 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	NPIPA2	E9PIF3	369 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	NPIPA3	F8WFD2	350 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	CDC7	O00311	574 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	AQP7	O14520	342 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	ERI3	O43414	337 aa	Known RBP	10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	WDR1	O75083	606 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	GLI4	P10075	376 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	PPP2R1B	P30154	601 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	GGT5	P36269	586 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	PEX19	P40855	299 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	SOX3	P41225	446 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	ZFP36L2	P47974	494 aa	Known RBP	10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	HNRNPF	P52597	415 aa	Known RBP	10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	HK2	P52789	917 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	MTTP	P55157	894 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	LIM2	P55344	173 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	PLGLB1	Q02325	96 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	FOXO1	Q12778	655 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	ILF2	Q12905	390 aa	Known RBP	10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	BMPR2	Q13873	1038 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	SLC25A35	Q3KQZ1	300 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	CDKL4	Q5MAI5	379 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	RTL6	Q6ICC9	239 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	ABHD17C	Q6PCB6	329 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	IL20RB	Q6UXL0	311 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	B3GNT6	Q6ZMB0	384 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	RTL4	Q6ZR62	310 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	TRIL	Q7L0X0	811 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	CNPY4	Q8N129	248 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	KRT78	Q8N1N4	520 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	FAM109A	Q8N4B1	249 aa		10.68	□□□□□ -0.7
CTNND1-238	ENST00000534647	OR5L2	Q8NGL0	311 aa		10.68	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms