RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 UNKLQ9H9P5 680 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 UBTD1Q9HAC8 227 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 LRTM1Q9HBL6 345 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 GLOD4Q9HC38 313 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SEMA4BQ9NPR2 832 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 LMBRD1Q9NUN5 540 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 TAB2Q9NYJ8 693 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 HCN3Q9P1Z3 774 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 NFKBIL1Q9UBC1 381 aaPredicted RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 MYO1AQ9UBC5 1043 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 SPRR3Q9UBC9 169 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 TEKT2Q9UIF3 430 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 RWDD2AQ9UIY3 292 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 KCNE5Q9UJ90 142 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 RUVBL1Q9Y265 456 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 ASF1AQ9Y294 204 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 HCFC1P51610 2035 aa2.74□□□□□ -1.97
CHMP4A-208ENST00000534106 LOC285095A0A1B0GVY8 99 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 FEZF1A0PJY2 475 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CCDC151A5D8V7 595 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CGB1A6NKQ9 187 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SGK494L7N484 410 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 QSOX1O00391 747 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 STX7O15400 261 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 P2RX6O15547 441 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PRKNO60260 465 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 RNF8O76064 485 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SRP72O76094 671 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 FGFR1OPO95684 399 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 FTLP02792 175 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 RFPL3SP0C7P2 107 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ATP1B2P14415 290 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CD9P21926 228 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CA4P22748 312 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 GCSHP23434 173 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ECHS1P30084 290 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PKLRP30613 574 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SHMT2P34897 504 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PCK1P35558 622 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 GNALP38405 381 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 MAGEA5P43359 124 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CD151P48509 253 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CYB561P49447 251 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PRLHRP49683 370 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 HLCSP50747 726 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF136P52737 540 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 TAS2R40P59535 323 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 DEFA6Q01524 100 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PLGLB1Q02325 96 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 AP1B1Q10567 949 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 DPYSL3Q14195 570 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 KIR2DS3Q14952 304 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ODF1Q14990 250 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PAFAH1B3Q15102 231 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ACKR1Q16570 336 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CHRFAM7AQ494W8 412 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 FAM153CQ494X1 144 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CCDC38Q502W7 563 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PDLIM3Q53GG5 364 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 XKR6Q5GH73 641 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 TCTE1Q5JU00 501 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CCDC183Q5T5S1 534 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 C1orf185Q5T7R7 199 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 THEMIS2Q5TEJ8 643 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PLAG1Q6DJT9 500 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF425Q6IV72 752 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF529Q6P280 563 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 BHLHB9Q6PI77 547 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PAPD4Q6PIY7 484 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 TRILQ7L0X0 811 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF771Q7L3S4 317 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 TAS2R42Q7RTR8 314 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SERPINA9Q86WD7 417 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC13A5Q86YT5 568 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PSTKQ8IV42 348 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 LYSMD2Q8IV50 215 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PIANPQ8IYJ0 282 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 TBC1D21Q8IYX1 336 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 LRRC75A-AS1Q8N1F1 130 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PQLC1Q8N2U9 271 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 C9orf106Q8NAJ2 232 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ZFP62Q8NB50 900 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 KCTD6Q8NC69 237 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 OR4K2Q8NGD2 314 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 OR13C4Q8NGS5 318 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 C16orf52Q8NHV5 167 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 M1APQ8TC57 530 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 METTL21AQ8WXB1 218 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 RAPGEF5Q92565 580 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 DCUN1D1Q96GG9 259 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 OXNAD1Q96HP4 312 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 FBXL20Q96IG2 436 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CABS1Q96KC9 395 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SPATA13Q96N96 652 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CCL19Q99731 98 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 ADI1Q9BV57 179 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC25A51Q9H1U9 297 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 SH2D2AQ9NP31 389 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms