RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	BBOX1	O75936	387 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	GAS8-AS1	O95177	125 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	PIGN	O95427	931 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	BAG3	O95817	575 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	IL1B	P01584	269 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	UGT2B4	P06133	528 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF853	P0CG23	659 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	RRAS	P10301	218 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	CEACAM1	P13688	526 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	B4GALT1	P15291	398 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	JAK1	P23458	1154 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	HTR2A	P28223	471 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	HOXD10	P28358	340 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	PRDX2	P32119	198 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	OR1D2	P34982	312 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	RFC4	P35249	363 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	NKX2-1	P43699	371 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	GLIPR1	P48060	266 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	SLC1A6	P48664	564 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	NUMB	P49757	651 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	BRWD1-AS2	P59051	145 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF415	Q09FC8	603 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	DMP1	Q13316	513 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	RFTN1	Q14699	578 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	TPD52L1	Q16890	204 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	DEFB115	Q30KQ5	88 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	IL23R	Q5VWK5	629 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	NKAIN2	Q5VXU1	208 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	UGT3A1	Q6NUS8	523 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	GDPD4	Q6W3E5	623 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	FOXL2NB	Q6ZUU3	175 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	PAQR9	Q6ZVX9	377 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	SFR1	Q86XK3	245 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	MAP7D3	Q8IWC1	876 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	DCUN1D3	Q8IWE4	304 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	MMD2	Q8IY49	270 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	LRRC17	Q8N6Y2	441 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF441	Q8N8Z8	693 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	SMYD1	Q8NB12	490 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	CCDC148	Q8NFR7	591 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	OR13J1	Q8NGT2	312 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	AKR7L	Q8NHP1	331 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	FGFBP3	Q8TAT2	258 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	CHPT1	Q8WUD6	406 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ANKRD49	Q8WVL7	239 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	RLN3	Q8WXF3	142 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	C4orf36	Q96KX1	117 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	GPR137	Q96N19	417 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF396	Q96N95	335 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	GSDMA	Q96QA5	445 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	PLIN2	Q99541	437 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	MTERF1	Q99551	399 aa	Known RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	LZTS2	Q9BRK4	669 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ALG12	Q9BV10	488 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	NACAP1	Q9BZK3	213 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	ARRDC1-AS1	Q9H2J1	176 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	TRPC7	Q9HCX4	862 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	BAIAP2L1	Q9UHR4	511 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	CLEC4A	Q9UMR7	237 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	CHMP2B	Q9UQN3	213 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	TMED7	Q9Y3B3	224 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	PCDHAC2	Q9Y5I4	1007 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.22	□□□□□ -1.73
ATM-223	ENST00000533979	CNTNAP1	P78357	1384 aa		4.22	□□□□□ -1.73
ATM-223	ENST00000533979	IL16	Q14005	1332 aa		4.21	□□□□□ -1.73
ATM-223	ENST00000533979	TTC41P	Q6P2S7	1318 aa		4.21	□□□□□ -1.73
ATM-223	ENST00000533979	CCDC144A	A2RUR9	1427 aa		4.21	□□□□□ -1.73
ATM-223	ENST00000533979	PIK3C2G	O75747	1445 aa		4.21	□□□□□ -1.73
ATM-223	ENST00000533979	LAMC1	P11047	1609 aa		4.21	□□□□□ -1.73
ATM-223	ENST00000533979	COL22A1	Q8NFW1	1626 aa	Predicted RBP	4.21	□□□□□ -1.73
ATM-223	ENST00000533979	WDR81	Q562E7	1941 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	TRAV18	A0A075B6X5	111 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	OR5K3	A6NET4	321 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	ANKRD61	A6NGH8	418 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	PRR32	B1ATL7	298 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979		M0R296	226 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	B4GALT2	O60909	372 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	RHBDL1	O75783	438 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	BMP10	O95393	424 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	SERPINF2	P08697	491 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	CETP	P11597	493 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	GNS	P15586	552 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	GOT1	P17174	413 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	S1PR1	P21453	382 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	NR0B1	P51843	470 aa	Known RBP	4.21	□□□□□ -1.74
ATM-223	ENST00000533979	PRRX1	P54821	245 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	ACTR3	P61158	418 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	MYBPC1	Q00872	1141 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	ZBTB17	Q13105	803 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	PLD1	Q13393	1074 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	PDK3	Q15120	406 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	CMPK2	Q5EBM0	449 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	FUT10	Q6P4F1	479 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	CDHR3	Q6ZTQ4	885 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	SMIM29	Q86T20	159 aa		4.21	□□□□□ -1.74
ATM-223	ENST00000533979	LUZP1	Q86V48	1076 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms