RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GULP1Q9UBP9 304 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 H3BQ06 376 aaPredicted RBP18.39■□□□□ 0.54
CAPN1-226ENST00000533820 CTSLP07711 333 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 HSD3B1P14060 373 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 HSD3B2P26439 372 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 KCNC3Q14003 757 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 METTL3Q86U44 580 aaKnown RBP18.39■□□□□ 0.54
CAPN1-226ENST00000533820 RASSF5Q8WWW0 418 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 TCEAL4Q96EI5 215 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 METTL2AQ96IZ6 378 aaKnown RBP18.39■□□□□ 0.54
CAPN1-226ENST00000533820 FTSJ1Q9UET6 329 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 TBC1D24Q9ULP9 559 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 ANGPT4Q9Y264 503 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 WBP11Q9Y2W2 641 aaKnown RBP18.39■□□□□ 0.54
CAPN1-226ENST00000533820 SNX11Q9Y5W9 270 aa18.39■□□□□ 0.54
CAPN1-226ENST00000533820 KPNA3O00505 521 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-226ENST00000533820 TGM5O43548 720 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 DPM1O60762 260 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 ELFN1P0C7U0 828 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 CCR2P41597 374 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 TAGLNQ01995 201 aaKnown RBP18.39■□□□□ 0.53
CAPN1-226ENST00000533820 BAK1Q16611 211 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 HENMT1Q5T8I9 393 aaKnown RBP18.39■□□□□ 0.53
CAPN1-226ENST00000533820 CCDC190Q86UF4 302 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 CPXM2Q8N436 756 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 HORMAD2Q8N7B1 307 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 MMP28Q9H239 520 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 ATP6V1HQ9UI12 483 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 MKLN1Q9UL63 735 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 KLK4Q9Y5K2 254 aa18.39■□□□□ 0.53
CAPN1-226ENST00000533820 TRIM77I1YAP6 450 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 KLHL18O94889 574 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 STATHP02808 62 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 CYP2A6P11509 494 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 TYRP14679 529 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 CFL1P23528 166 aaKnown RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 PKLRP30613 574 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 UQCRC1P31930 480 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 OPRD1P41143 372 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 MPP7Q5T2T1 576 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 ZDHHC20Q5W0Z9 365 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 KCTD20Q7Z5Y7 419 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 POLR2J2Q9GZM3 115 aaKnown RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 GPBP1L1Q9HC44 474 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 TVP23BQ9NYZ1 205 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 SLC5A10A0PJK1 596 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 ZAR1LA6NP61 321 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 SEMA7AO75326 666 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 C1orf105O95561 183 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 CLEC2LP0C7M8 214 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 CTSAP10619 480 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 SSTR4P31391 388 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 TLE2Q04725 743 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 EEF1A2Q05639 463 aaKnown RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 EIF4HQ15056 248 aaKnown RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 AGAP6Q5VW22 663 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 TMIGD1Q6UXZ0 262 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 CAMKMTQ7Z624 323 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 OR6F1Q8NGZ6 308 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 AGAP4Q96P64 663 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 SNX18Q96RF0 628 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 C19orf43Q9BQ61 176 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 THSD1Q9NS62 852 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 TMCC3Q9ULS5 477 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 C21orf58P58505 322 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 B2MP61769 119 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 CNTN1Q12860 1018 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 FAM122CQ6P4D5 195 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 FAM46DQ8NEK8 389 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 SLC38A5Q8WUX1 472 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 LMLNQ96KR4 655 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 RC3H2Q9HBD1 1191 aaKnown RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 SLAMF7Q9NQ25 335 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 TAAR2Q9P1P5 351 aa18.38■□□□□ 0.53
CAPN1-226ENST00000533820 YARS2Q9Y2Z4 477 aaKnown RBP18.38■□□□□ 0.53
CAPN1-226ENST00000533820 WASHC1A8K0Z3 465 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 TSPAN4O14817 238 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 CSO75390 466 aaKnown RBP18.37■□□□□ 0.53
CAPN1-226ENST00000533820 IFNA14P01570 189 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 CSF2P04141 144 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 C1GALT1C1LP0DN25 315 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 SPHARQ15513 63 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF630Q2M218 657 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-226ENST00000533820 SPDYE7PQ495Y7 208 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 LY6G5CQ5SRR4 150 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 WASH2PQ6VEQ5 465 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 C11orf96Q7Z7L8 435 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 SLC39A11Q8N1S5 342 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 OR9Q1Q8NGQ5 310 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 MAPKAP1Q9BPZ7 522 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 CDCA4Q9BXL8 241 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 NLNQ9BYT8 704 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 PRRG3Q9BZD7 231 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 ARAFP10398 606 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 RHCEP18577 417 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 TARDBPQ13148 414 aaKnown RBP eCLIP18.37■□□□□ 0.53
CAPN1-226ENST00000533820 PIN1Q13526 163 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms