RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 C6orf203Q9P0P8 240 aaPredicted RBP8.48□□□□□ -1.05
PACS1-214ENST00000533811 SLC17A6Q9P2U8 582 aa8.48□□□□□ -1.05
PACS1-214ENST00000533811 IKZF3Q9UKT9 509 aa8.48□□□□□ -1.05
PACS1-214ENST00000533811 SONP18583 2426 aaKnown RBP8.48□□□□□ -1.05
PACS1-214ENST00000533811 CD8B2A6NJW9 211 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 DYRK3O43781 588 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 SH3BGRLO75368 114 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 CLEC3AO75596 197 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 MLNP12872 115 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 GNAZP19086 355 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 GABRB3P28472 473 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 SERPINB3P29508 390 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 CPOXP36551 454 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 MAGEA6P43360 314 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 TGM3Q08188 693 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 RCAN2Q14206 197 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 CRYMQ14894 314 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 C18orf21Q32NC0 220 aaPredicted RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 DCST1Q5T197 706 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 BICRALQ6AI39 1079 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 ADNP2Q6IQ32 1131 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 ABHD17CQ6PCB6 329 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 SBSNQ6UWP8 590 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 SYDE1Q6ZW31 735 aaPredicted RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 FRA10AC1Q70Z53 315 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 SLC29A4Q7RTT9 530 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 AGGF1Q8N302 714 aaeCLIP8.47□□□□□ -1.05
PACS1-214ENST00000533811 C9orf106Q8NAJ2 232 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 MCUQ8NE86 351 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 TRIM58Q8NG06 486 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 NUBPLQ8TB37 319 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 ISL2Q96A47 359 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 PPWD1Q96BP3 646 aaKnown RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 SENP5Q96HI0 755 aaPredicted RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 F2RL3Q96RI0 385 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 MAPKAP1Q9BPZ7 522 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 UGT2B28Q9BY64 529 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 PRDM14Q9GZV8 571 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 PPANQ9NQ55 473 aaKnown RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 NDRG3Q9UGV2 375 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 CNOT11Q9UKZ1 510 aaKnown RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 CHCHD2Q9Y6H1 151 aaPredicted RBP8.47□□□□□ -1.05
PACS1-214ENST00000533811 SPACA6W5XKT8 324 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 STAB1Q9NY15 2570 aa8.47□□□□□ -1.05
PACS1-214ENST00000533811 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 IQANK1A0A1B0GTG1 560 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 MBD3L4A6NDZ8 208 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 MBD3L3A6NE82 208 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 NCF1BA6NI72 391 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 MBD3L5A6NJ08 208 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 NCF1CA8MVU1 366 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 HRKO00198 91 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 CDC7O00311 574 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 RTCAO00442 366 aaKnown RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 GNB5O14775 395 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 SNPHO15079 494 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 FGF17O60258 216 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 IL18BPO95998 194 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 C1QAP02745 245 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 AHSGP02765 367 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 FBXO45P0C2W1 286 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 CYP4B1P13584 511 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 NID1P14543 1247 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 NCF1P14598 390 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 CPN2P22792 545 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 HPDP32754 393 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 GDF5P43026 501 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 CDK9P50750 372 aaKnown RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 HERVK_113P63132 956 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 ERVK-8P63133 956 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 FOXF2Q12947 444 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 EIPR1Q53HC9 387 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 WIPI1Q5MNZ9 446 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 VASNQ6EMK4 673 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 PLXDC2Q6UX71 529 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 TMEM64Q6YI46 380 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 ZNF793Q6ZN11 406 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 SLCO4C1Q6ZQN7 724 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 DND1Q8IYX4 353 aaKnown RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 GCNT2Q8N0V5 402 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 SLC15A4Q8N697 577 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 MBD3L2Q8NHZ7 208 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 ABTB1Q969K4 478 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 ANKRD9Q96BM1 317 aaPredicted RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 INTS12Q96CB8 462 aaKnown RBP8.46□□□□□ -1.06
PACS1-214ENST00000533811 PIK3IP1Q96FE7 263 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 WDYHV1Q96HA8 205 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 ART5Q96L15 291 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 SIGLEC10Q96LC7 697 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 PIP5K1AQ99755 562 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 ERVK-6Q9BXR3 956 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 JKAMPQ9P055 326 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 ERVK-19Q9WJR5 959 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 USF3Q68DE3 2245 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 EXPH5Q8NEV8 1989 aa8.46□□□□□ -1.06
PACS1-214ENST00000533811 FBN1P35555 2871 aaKnown RBP8.45□□□□□ -1.06
PACS1-214ENST00000533811 H0Y3Z8 333 aa8.45□□□□□ -1.06
PACS1-214ENST00000533811 TP53I11O14683 189 aa8.45□□□□□ -1.06
PACS1-214ENST00000533811 TRIM3O75382 744 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms