RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 NR4A3Q92570 626 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 PEX13Q92968 403 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 LINGO1Q96FE5 620 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 CFAP36Q96G28 342 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 OR4K3Q96R72 315 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 OLFM1Q99784 485 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 AICDAQ9GZX7 198 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 NELFAQ9H3P2 528 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 KLHL31Q9H511 634 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 LIN28AQ9H9Z2 209 aaKnown RBP5.57□□□□□ -1.52
SOX6-216ENST00000533658 FBXO5Q9UKT4 447 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 PPP2R2CQ9Y2T4 447 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 DHRS7Q9Y394 339 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 TNPO3Q9Y5L0 923 aaKnown RBP5.57□□□□□ -1.52
SOX6-216ENST00000533658 ZNF469Q96JG9 3925 aaPredicted RBP5.57□□□□□ -1.52
SOX6-216ENST00000533658 ANKRD12Q6UB98 2062 aa5.57□□□□□ -1.52
SOX6-216ENST00000533658 NUP210LQ5VU65 1888 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 LOC102723996A0A087X1L8 192 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 TRAV17A0A0B4J275 112 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 A0A1B0GUH1 482 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 FAM237BA0A1B0GVD1 139 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 OR5H15A6NDH6 313 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 SDR42E2A6NKP2 422 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 NPIPA5E9PKD4 350 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 H3BMM5 538 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 SLC16A5O15375 505 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 NDUFS4O43181 175 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 OR1F1O43749 312 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 ZBTB14O43829 449 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 PRAMEF2O60811 474 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 RASAL1O95294 804 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 TSPAN12O95859 305 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 AHSGP02765 367 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 CCDC175P0C221 793 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 EZRP15311 586 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 NPPBP16860 134 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 MAOAP21397 527 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 HTR1EP28566 365 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 ATP5DP30049 168 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 SKIV2L2P42285 1042 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 MAGEA3P43357 314 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 MAGEA6P43360 314 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 AVPR1BP47901 424 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 RAB8AP61006 207 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 RHAGQ02094 409 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 OC90Q02509 493 aaPredicted RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 TUBA3CQ13748 450 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 CRYMQ14894 314 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 ABRAXAS2Q15018 415 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 LONRF1Q17RB8 773 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 DEFB134Q4QY38 66 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 ZNF766Q5HY98 468 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 ACER2Q5QJU3 275 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 ADNP2Q6IQ32 1131 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 CAPN13Q6MZZ7 669 aaPredicted RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 TUBA3EQ6PEY2 450 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 PAPD4Q6PIY7 484 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 TMEM207Q6UWW9 146 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 LARP4Q71RC2 724 aaKnown RBP eCLIP5.56□□□□□ -1.52
SOX6-216ENST00000533658 CPEB2Q7Z5Q1 589 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 MRGPRGQ86SM5 289 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 LDLRAD3Q86YD5 345 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 SLC35F6Q8N357 371 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 TXLNBQ8N3L3 684 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 DOK4Q8TEW6 326 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 SLC13A3Q8WWT9 602 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 KCNJ9Q92806 393 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 HAS2Q92819 552 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 LRGUKQ96M69 825 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 DDX47Q9H0S4 455 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 CCDC68Q9H2F9 335 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 CDCP1Q9H5V8 836 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 KCNK13Q9HB14 408 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 MKKSQ9NPJ1 570 aaPredicted RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 PPANQ9NQ55 473 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 CCDC177Q9NQR7 707 aaPredicted RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 FAM114A2Q9NRY5 505 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 LANCL2Q9NS86 450 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 C14orf105Q9NVL8 296 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 INTS10Q9NVR2 710 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 TRMT1Q9NXH9 659 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 SEC14L3Q9UDX4 400 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 TRMT6Q9UJA5 497 aaKnown RBP5.56□□□□□ -1.52
SOX6-216ENST00000533658 NPIPA1Q9UND3 350 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 CHMP2BQ9UQN3 213 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 PSAT1Q9Y617 370 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 PCM1Q15154 2024 aa5.56□□□□□ -1.52
SOX6-216ENST00000533658 SCN3AQ9NY46 2000 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 USP27XA6NNY8 438 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 GABRR3A8MPY1 467 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 G3V3Y1 287 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 CDC7O00311 574 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 CHST10O43529 356 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 PRKNO60260 465 aaPredicted RBP5.55□□□□□ -1.52
SOX6-216ENST00000533658 KLHL41O60662 606 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 SLC19A2O60779 497 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 SH3BGRLO75368 114 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 PDE9AO76083 593 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 CCNDBP1O95273 360 aa5.55□□□□□ -1.52
SOX6-216ENST00000533658 NSA2O95478 260 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms