RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MAN2B2Q9Y2E5 1009 aa16.36■□□□□ 0.21
NXF1-216ENST00000533499 ANKRD11Q6UB99 2663 aaPredicted RBP16.36■□□□□ 0.21
NXF1-216ENST00000533499 A0A087WV48 116 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 NSG1A0A0A6YYJ2 146 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 C9JVG2 144 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 SOCS6O14544 535 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 SCAMP2O15127 329 aaKnown RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 IDO1P14902 403 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 CSNK2A2P19784 350 aaPredicted RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 EFNA1P20827 205 aaPredicted RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 PRPS1L1P21108 318 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 DRD4P21917 467 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 RPL3P39023 403 aaKnown RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 PGDP52209 483 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 CLDN8P56748 225 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 UFM1P61960 85 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 PLIN5Q00G26 463 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 VAC14Q08AM6 782 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 CPTPQ5TA50 214 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 PAPD4Q6PIY7 484 aaKnown RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 TMEM205Q6UW68 189 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 SPATA21Q7Z572 469 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 OR7A2PQ8NGA2 310 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 OR11G2Q8NGC1 345 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.35■□□□□ 0.218e-29■■■■■ 62
NXF1-216ENST00000533499 IP6K3Q96PC2 410 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 PRPF18Q99633 342 aaKnown RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 LPAR4Q99677 370 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 KCNK13Q9HB14 408 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 ZNF160Q9HCG1 818 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 SLC35C2Q9NQQ7 365 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 ADAM21Q9UKJ8 722 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 CES1P1Q9UKY3 287 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 TRIM33Q9UPN9 1127 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 EXO1Q9UQ84 846 aaKnown RBP16.35■□□□□ 0.21
NXF1-216ENST00000533499 CLCA3PQ9Y6N3 262 aa16.35■□□□□ 0.21
NXF1-216ENST00000533499 IGKV3D-11A0A0A0MRZ8 115 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 GABRR3A8MPY1 467 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 CYC1P08574 325 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 CPMP14384 443 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 PORP16435 677 aaPredicted RBP16.34■□□□□ 0.21
NXF1-216ENST00000533499 DDX5P17844 614 aaKnown RBP16.34■□□□□ 0.21
NXF1-216ENST00000533499 NTSP30990 170 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 CHAF1BQ13112 559 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 GSTA3Q16772 222 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 PRSS53Q2L4Q9 553 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 MED25Q71SY5 747 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 NDUFAF7Q7L592 441 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 CCDC116Q8IYX3 515 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 MIER2Q8N344 545 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 ADAMTS17Q8TE56 1095 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 CIDECQ96AQ7 238 aaPredicted RBP16.34■□□□□ 0.21
NXF1-216ENST00000533499 ADAP2Q9NPF8 381 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 EHD3Q9NZN3 535 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 GPR45Q9Y5Y3 372 aa16.34■□□□□ 0.21
NXF1-216ENST00000533499 IGHV1-45A0A0A0MS14 117 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 SRRM3A6NNA2 597 aaPredicted RBP16.33■□□□□ 0.2
NXF1-216ENST00000533499 C17orf105B2RV13 164 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 PCDH17O14917 1159 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 PDPK1O15530 556 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 DYRK3O43781 588 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 COX6A1P12074 109 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 STT3AP46977 705 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 NCBP2P52298 156 aaKnown RBP eCLIP16.33■□□□□ 0.2
NXF1-216ENST00000533499 PCOLCEQ15113 449 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 ST3GAL2Q16842 350 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 BTBD16Q32M84 506 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 ZNF385BQ569K4 471 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 LRRC25Q8N386 305 aaPredicted RBP16.33■□□□□ 0.2
NXF1-216ENST00000533499 AMER2Q8N7J2 671 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 ADCY4Q8NFM4 1077 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 THAP4Q8WY91 577 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 RIT1Q92963 219 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 CNRIP1Q96F85 164 aaPredicted RBP16.33■□□□□ 0.2
NXF1-216ENST00000533499 FER1L6-AS2Q96M78 137 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 PELOQ9BRX2 385 aaKnown RBP16.33■□□□□ 0.2
NXF1-216ENST00000533499 CNPPD1Q9BV87 410 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 BRINP2Q9C0B6 783 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 OR8D2Q9GZM6 311 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 CLDN16Q9Y5I7 305 aa16.33■□□□□ 0.2
NXF1-216ENST00000533499 MAP1BP46821 2468 aaKnown RBP16.33■□□□□ 0.2
NXF1-216ENST00000533499 FREM2Q5SZK8 3169 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 A6NL46 340 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 K7ENP7 123 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 SLC22A3O75751 556 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 SLC35E2P0CK97 266 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 LAMP1P11279 417 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 CLNS1AP54105 237 aaKnown RBP16.32■□□□□ 0.2
NXF1-216ENST00000533499 IGLV3-21P80748 117 aaPredicted RBP16.32■□□□□ 0.2
NXF1-216ENST00000533499 DUSP2Q05923 314 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 BIKQ13323 160 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 ZNF267Q14586 743 aaPredicted RBP16.32■□□□□ 0.2
NXF1-216ENST00000533499 ELAVL1Q15717 326 aaKnown RBP16.32■□□□□ 0.2
NXF1-216ENST00000533499 LTB4RQ15722 352 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 PDCD4Q53EL6 469 aaKnown RBP16.32■□□□□ 0.2
NXF1-216ENST00000533499 INO80CQ6PI98 192 aaPredicted RBP16.32■□□□□ 0.2
NXF1-216ENST00000533499 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
NXF1-216ENST00000533499 DGAT2L6Q6ZPD8 337 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms