RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 ARMC10Q8N2F6 343 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 THAP3Q8WTV1 239 aaPredicted RBP13.87□□□□□ -0.19
PUF60-221ENST00000533162 FAR1Q8WVX9 515 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 SENP5Q96HI0 755 aaPredicted RBP13.87□□□□□ -0.19
PUF60-221ENST00000533162 METTL2AQ96IZ6 378 aaKnown RBP13.87□□□□□ -0.19
PUF60-221ENST00000533162 ACPTQ9BZG2 426 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 SHCBP1LQ9BZQ2 653 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
PUF60-221ENST00000533162 PFDN4Q9NQP4 134 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 OLAHQ9NV23 265 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 CLDN16Q9Y5I7 305 aa13.87□□□□□ -0.19
PUF60-221ENST00000533162 TNRC6AQ8NDV7 1962 aaKnown RBP13.86□□□□□ -0.19
PUF60-221ENST00000533162 MYOCOSA0A1B0GUC4 107 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 OR6C76A6NM76 312 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 PCDH7O60245 1069 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 ITGA10O75578 1167 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 SP1P08047 785 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 DRD2P14416 443 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 PORP16435 677 aaPredicted RBP13.86□□□□□ -0.19
PUF60-221ENST00000533162 ALDH3A1P30838 453 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 GPR143P51810 404 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 XKP51811 444 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 BTKQ06187 659 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 GALNT1Q10472 559 aaPredicted RBP13.86□□□□□ -0.19
PUF60-221ENST00000533162 PCLAFQ15004 111 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 SPRED3Q2MJR0 410 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 SLC25A25Q6KCM7 469 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 SLC29A4Q7RTT9 530 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 FAM76AQ8TAV0 307 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 GRHL3Q8TE85 626 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 ASB15Q8WXK1 588 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 PPWD1Q96BP3 646 aaKnown RBP13.86□□□□□ -0.19
PUF60-221ENST00000533162 C19orf60Q96EN9 201 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 FBXL20Q96IG2 436 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 HBEGFQ99075 208 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 CNPPD1Q9BV87 410 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 C12orf65Q9H3J6 166 aaKnown RBP13.86□□□□□ -0.19
PUF60-221ENST00000533162 GIMAP4Q9NUV9 329 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 ANKRD10Q9NXR5 420 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 MYOTQ9UBF9 498 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 ERVK-11Q9UQG0 969 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 WBP11Q9Y2W2 641 aaKnown RBP13.86□□□□□ -0.19
PUF60-221ENST00000533162 PCDHA9Q9Y5H5 950 aa13.86□□□□□ -0.19
PUF60-221ENST00000533162 A8MVJ9 347 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 KLRC4-KLRK1H3BQV0 150 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 UBFD1O14562 309 aaKnown RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 AZIN1O14977 448 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 PGRMC2O15173 223 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 TM9SF1O15321 606 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 SLC25A12O75746 678 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 RSL1D1O76021 490 aaKnown RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 DDAH2O95865 285 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 NEFHP12036 1026 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 EDN3P14138 238 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 CSNK2A2P19784 350 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 ALDH9A1P49189 494 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 RNF4P78317 190 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 ZNF267Q14586 743 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 NR6A1Q15406 480 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 MAPKAPK3Q16644 382 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 PRR30Q53SZ7 412 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 TCHHL1Q5QJ38 904 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 FHL5Q5TD97 284 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 SPINK14Q6IE38 97 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 SLC48A1Q6P1K1 146 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 OPN5Q6U736 354 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 RNF111Q6ZNA4 994 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 TRIM46Q7Z4K8 759 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 GALNT12Q8IXK2 581 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 ST6GALNAC3Q8NDV1 305 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 MDS2Q8NDY4 140 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 SLC22A8Q8TCC7 542 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 TM4SF18Q96CE8 201 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 PGM2Q96G03 612 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 KCNA7Q96RP8 456 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 BARD1Q99728 777 aaKnown RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 GATA5Q9BWX5 397 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 TRIM45Q9H8W5 580 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 TIMMDC1Q9NPL8 285 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 HPF1Q9NWY4 346 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 SIRT5Q9NXA8 310 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 TEX10Q9NXF1 929 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 SLC17A7Q9P2U7 560 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 KLF13Q9Y2Y9 288 aaPredicted RBP13.85□□□□□ -0.19
PUF60-221ENST00000533162 ACTL7BQ9Y614 415 aa13.85□□□□□ -0.19
PUF60-221ENST00000533162 ANKUB1A6NFN9 424 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 PRKRAO75569 313 aaKnown RBP13.84□□□□□ -0.19
PUF60-221ENST00000533162 ERAL1O75616 437 aaKnown RBP13.84□□□□□ -0.19
PUF60-221ENST00000533162 SNUPNO95149 360 aaKnown RBP13.84□□□□□ -0.19
PUF60-221ENST00000533162 ZWINTO95229 277 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 ANXA4P09525 319 aaPredicted RBP13.84□□□□□ -0.19
PUF60-221ENST00000533162 CPMP14384 443 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 NT5EP21589 574 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 GNLYP22749 145 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 TIA1P31483 386 aaKnown RBP eCLIP13.84□□□□□ -0.193e-7■□□□□ 9.9
PUF60-221ENST00000533162 HMGCS1Q01581 520 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 MPEG1Q2M385 716 aa13.84□□□□□ -0.19
PUF60-221ENST00000533162 HLA-DQA1Q5Y7H0 255 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms