RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 OR10H2O60403 315 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 CCNT2O60583 730 aaKnown RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 PRAMEF4O60810 478 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 ELK3P41970 407 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 STT3AP46977 705 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 MASP1P48740 699 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 HSPA7P48741 367 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 TAS2R39P59534 338 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 HERVK_113P63132 956 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 ERVK-8P63133 956 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 IRF8Q02556 426 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 SF3B4Q15427 424 aaKnown RBP eCLIP11.95□□□□□ -0.59e-50■■■■■ 86.1
COPB1-209ENST00000533096 ADPRMQ3LIE5 342 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 FBXL19-AS1Q494R0 122 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 WIPI1Q5MNZ9 446 aaPredicted RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 PRAMEF9Q5VWM5 478 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 SHEQ5VZ18 495 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 BICRALQ6AI39 1079 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 SLC29A4Q7RTT9 530 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 SLC15A4Q8N697 577 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 TRIM58Q8NG06 486 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 NUBPLQ8TB37 319 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 HSPBAP1Q96EW2 488 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 TBCDQ9BTW9 1192 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 RBM24Q9BX46 236 aaKnown RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 ERVK-6Q9BXR3 956 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 PHACTR1Q9C0D0 580 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 ROGDIQ9GZN7 287 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 RPF2Q9H7B2 306 aaKnown RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 ASIC3Q9UHC3 531 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 CNOT11Q9UKZ1 510 aaKnown RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 ERVK-19Q9WJR5 959 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 CHCHD2Q9Y6H1 151 aaPredicted RBP11.95□□□□□ -0.5
COPB1-209ENST00000533096 ACANP16112 2415 aa11.95□□□□□ -0.5
COPB1-209ENST00000533096 FAM95CA0A1B0GW59 222 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 FAM171A2A8MVW0 826 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CES2O00748 559 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SMPD2O60906 423 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 PRKRAO75569 313 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 HRGP04196 525 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 ZNF37AP17032 561 aaPredicted RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 BMP7P18075 431 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 GSTM2P28161 218 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 OPRM1P35372 400 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SSR2P43308 183 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CPA2P48052 419 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SLC6A12P48065 614 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SLC12A2P55011 1212 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 FBXW4P57775 412 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CDKL1Q00532 357 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SRYQ05066 204 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CRYZQ08257 329 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 TBL3Q12788 808 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 FOXF2Q12947 444 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CHIT1Q13231 466 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 EIPR1Q53HC9 387 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 Q5PR19 223 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 NSUN5P2Q63ZY6 315 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 C18orf63Q68DL7 685 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 PLXDC2Q6UX71 529 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 RNF111Q6ZNA4 994 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SYDE1Q6ZW31 735 aaPredicted RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 YRDCQ86U90 279 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 GPSM1Q86YR5 675 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 KRTAP1-3Q8IUG1 177 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 ANKMY2Q8IV38 441 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 PM20D2Q8IYS1 436 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 SRFBP1Q8NEF9 429 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 PTCD3Q96EY7 689 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 Q96MF0 132 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 WDR83Q9BRX9 315 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 NAT9Q9BTE0 207 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 OR51B5Q9H339 312 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 PLAC1Q9HBJ0 212 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 QPCTLQ9NXS2 382 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CD274Q9NZQ7 290 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 CORO1CQ9ULV4 474 aaPredicted RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 EIF3LQ9Y262 564 aaKnown RBP11.94□□□□□ -0.5
COPB1-209ENST00000533096 PSAT1Q9Y617 370 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 ABCA4P78363 2273 aa11.94□□□□□ -0.5
COPB1-209ENST00000533096 MAP1AP78559 2803 aaPredicted RBP11.93□□□□□ -0.5
COPB1-209ENST00000533096 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 C2orf72A6NCS6 295 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 GLOD5A6NK44 160 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 GOLGA6L6A8MZA4 724 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 TP53I11O14683 189 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 GNB5O14775 395 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
COPB1-209ENST00000533096 ERN1O75460 977 aaKnown RBP11.93□□□□□ -0.5
COPB1-209ENST00000533096 STK16O75716 305 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 PIAS1O75925 651 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 IGKV3-11P04433 115 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 FBXO45P0C2W1 286 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 TMIGD3P0DMS9 266 aaPredicted RBP11.93□□□□□ -0.5
COPB1-209ENST00000533096 ALOX15P16050 662 aaPredicted RBP11.93□□□□□ -0.5
COPB1-209ENST00000533096 CD22P20273 847 aa11.93□□□□□ -0.5
COPB1-209ENST00000533096 HIST1H1TP22492 207 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms