RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 C5orf34Q96MH7 638 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 HES7Q9BYE0 225 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 TRIM45Q9H8W5 580 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-210ENST00000532935 MID1IP1Q9NPA3 183 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 KLHL1Q9NR64 748 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 OLAHQ9NV23 265 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 OXSMQ9NWU1 459 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 VPS29Q9UBQ0 182 aa14.3□□□□□ -0.12
CPSF1-210ENST00000532935 UTP20O75691 2785 aaKnown RBP14.3□□□□□ -0.12
CPSF1-210ENST00000532935 TMEM200CA6NKL6 621 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 UBFD1O14562 309 aaKnown RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 PGRMC2O15173 223 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 DYRK3O43781 588 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 ITGA10O75578 1167 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 EDN3P14138 238 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 CYB561P49447 251 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 HTR6P50406 440 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 HLCSP50747 726 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 MAPK12P53778 367 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 CFAP157Q5JU67 520 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 FHL5Q5TD97 284 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 NDUFAF5Q5TEU4 345 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 LIPMQ5VYY2 423 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 DGAT2L6Q6ZPD8 337 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 ZNF227Q86WZ6 799 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 SRRM1Q8IYB3 904 aaKnown RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 ST13P4Q8IZP2 240 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 C1orf52Q8N6N3 182 aaKnown RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 BANPQ8N9N5 519 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 TMEM178AQ8NBL3 297 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 PRR7Q8TB68 274 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 ZNF721Q8TF20 911 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 NR4A3Q92570 626 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 APOPT1Q96IL0 206 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 PKNOX2Q96KN3 472 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 KCNA7Q96RP8 456 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 SLX1AQ9BQ83 275 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 PELOQ9BRX2 385 aaKnown RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 IQCGQ9H095 443 aaKnown RBP14.29□□□□□ -0.12
CPSF1-210ENST00000532935 VIPAS39Q9H9C1 493 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 COPS7AQ9UBW8 275 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 MID2Q9UJV3 735 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 PLLPQ9Y342 182 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 TIMM22Q9Y584 194 aa14.29□□□□□ -0.12
CPSF1-210ENST00000532935 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 OR10H2O60403 315 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 GUCY1B2O75343 617 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 SLC25A12O75746 678 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 CRYABP02511 175 aaKnown RBP14.28□□□□□ -0.12
CPSF1-210ENST00000532935 SP1P08047 785 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 CHN1P15882 459 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 PMP22Q01453 160 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 PCLAFQ15004 111 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 SLC25A25Q6KCM7 469 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 C16orf47Q6ZP98 133 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-210ENST00000532935 C10orf107Q8IVU9 208 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 TMEM156Q8N614 296 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 OR8K3Q8NH51 312 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 DNAJB8Q8NHS0 232 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 CHTF18Q8WVB6 975 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 SREK1Q8WXA9 508 aaKnown RBP14.28□□□□□ -0.12
CPSF1-210ENST00000532935 SENP5Q96HI0 755 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-210ENST00000532935 TMEM109Q9BVC6 243 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 ACPTQ9BZG2 426 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 LIN28AQ9H9Z2 209 aaKnown RBP14.28□□□□□ -0.12
CPSF1-210ENST00000532935 MYOTQ9UBF9 498 aa14.28□□□□□ -0.12
CPSF1-210ENST00000532935 YARS2Q9Y2Z4 477 aaKnown RBP14.28□□□□□ -0.12
CPSF1-210ENST00000532935 H3BQF6 201 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 HRKO00198 91 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 OR2J2O76002 312 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 IGKV3-11P04433 115 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 SLC35E2P0CK97 266 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 PIK3R1P27986 724 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 SSR4P51571 173 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 TDGF1P3P51864 188 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 HK2P52789 917 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 FOXA1P55317 472 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 RNF4P78317 190 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 MAPKAPK3Q16644 382 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 GALNTL5Q7Z4T8 443 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 CYP4Z2PQ8N1L4 340 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 OR5L2Q8NGL0 311 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 TM4SF18Q96CE8 201 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 FBXL20Q96IG2 436 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 ART5Q96L15 291 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 ACBD3Q9H3P7 528 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 PCDHA9Q9Y5H5 950 aa14.27□□□□□ -0.13
CPSF1-210ENST00000532935 USP9YO00507 2555 aaPredicted RBP14.27□□□□□ -0.13
CPSF1-210ENST00000532935 A0A1W2PS29 197 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 C1orf226A1L170 272 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SERTM1A2A2V5 107 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 WWP2O00308 870 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 NME2P1O60361 137 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SEMA7AO75326 666 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms