RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 OR9Q2Q8NGE9 314 aa2.54□□□□□ -2
CD44-234ENST00000531873 OR4D10Q8NGI6 311 aa2.54□□□□□ -2
CD44-234ENST00000531873 GOLGA5Q8TBA6 731 aa2.54□□□□□ -2
CD44-234ENST00000531873 MAPK15Q8TD08 544 aa2.54□□□□□ -2
CD44-234ENST00000531873 CHPT1Q8WUD6 406 aa2.54□□□□□ -2
CD44-234ENST00000531873 ARHGAP45Q92619 1136 aa2.54□□□□□ -2
CD44-234ENST00000531873 PNPLA2Q96AD5 504 aa2.54□□□□□ -2
CD44-234ENST00000531873 RAB7BQ96AH8 199 aa2.54□□□□□ -2
CD44-234ENST00000531873 CNRIP1Q96F85 164 aaPredicted RBP2.54□□□□□ -2
CD44-234ENST00000531873 RBM18Q96H35 190 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 DCTN5Q9BTE1 182 aa2.54□□□□□ -2
CD44-234ENST00000531873 THUMPD2Q9BTF0 503 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 NLNQ9BYT8 704 aa2.54□□□□□ -2
CD44-234ENST00000531873 HOXD1Q9GZZ0 328 aa2.54□□□□□ -2
CD44-234ENST00000531873 GDF3Q9NR23 364 aa2.54□□□□□ -2
CD44-234ENST00000531873 YAE1D1Q9NRH1 226 aa2.54□□□□□ -2
CD44-234ENST00000531873 STARD5Q9NSY2 213 aa2.54□□□□□ -2
CD44-234ENST00000531873 TBK1Q9UHD2 729 aa2.54□□□□□ -2
CD44-234ENST00000531873 ICAM5Q9UMF0 924 aa2.54□□□□□ -2
CD44-234ENST00000531873 FOXJ3Q9UPW0 622 aa2.54□□□□□ -2
CD44-234ENST00000531873 FGD5Q6ZNL6 1462 aa2.53□□□□□ -2
CD44-234ENST00000531873 ABCC4O15439 1325 aa2.53□□□□□ -2
CD44-234ENST00000531873 A0A1B0GWJ7 208 aa2.53□□□□□ -2
CD44-234ENST00000531873 RNF222A6NCQ9 220 aa2.53□□□□□ -2
CD44-234ENST00000531873 OR5H15A6NDH6 313 aa2.53□□□□□ -2
CD44-234ENST00000531873 ZNF724A8MTY0 619 aa2.53□□□□□ -2
CD44-234ENST00000531873 SLCO1B7G3V0H7 640 aa2.53□□□□□ -2
CD44-234ENST00000531873 FAM72CH0Y354 149 aa2.53□□□□□ -2
CD44-234ENST00000531873 K7EQD1 137 aa2.53□□□□□ -2
CD44-234ENST00000531873 PDXKO00764 312 aa2.53□□□□□ -2
CD44-234ENST00000531873 SH2D1BO14796 132 aa2.53□□□□□ -2
CD44-234ENST00000531873 CLDN3O15551 220 aa2.53□□□□□ -2
CD44-234ENST00000531873 KIAA0513O60268 411 aa2.53□□□□□ -2
CD44-234ENST00000531873 MAGEC1O60732 1142 aa2.53□□□□□ -2
CD44-234ENST00000531873 VPS26AO75436 327 aa2.53□□□□□ -2
CD44-234ENST00000531873 ZFAND5O76080 213 aa2.53□□□□□ -2
CD44-234ENST00000531873 NXPH4O95158 308 aa2.53□□□□□ -2
CD44-234ENST00000531873 APRTP07741 180 aa2.53□□□□□ -2
CD44-234ENST00000531873 FHP07954 510 aa2.53□□□□□ -2
CD44-234ENST00000531873 HIST1H2AGP0C0S8 130 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 HSPA5P11021 654 aaKnown RBP2.53□□□□□ -2
CD44-234ENST00000531873 CYP2F1P24903 491 aa2.53□□□□□ -2
CD44-234ENST00000531873 TRIM23P36406 574 aa2.53□□□□□ -2
CD44-234ENST00000531873 MMP12P39900 470 aa2.53□□□□□ -2
CD44-234ENST00000531873 ACADSBP45954 432 aa2.53□□□□□ -2
CD44-234ENST00000531873 NUMBP49757 651 aa2.53□□□□□ -2
CD44-234ENST00000531873 ARFIP1P53367 373 aa2.53□□□□□ -2
CD44-234ENST00000531873 RPS4XP62701 263 aaKnown RBP2.53□□□□□ -2
CD44-234ENST00000531873 NAAAQ02083 359 aa2.53□□□□□ -2
CD44-234ENST00000531873 HSF2Q03933 536 aa2.53□□□□□ -2
CD44-234ENST00000531873 RFTN1Q14699 578 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 ZNF699Q32M78 642 aa2.53□□□□□ -2
CD44-234ENST00000531873 ADPRMQ3LIE5 342 aa2.53□□□□□ -2
CD44-234ENST00000531873 LRIT3Q3SXY7 679 aa2.53□□□□□ -2
CD44-234ENST00000531873 ZNF876PQ49A33 203 aa2.53□□□□□ -2
CD44-234ENST00000531873 RFTN2Q52LD8 501 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 TEX35Q5T0J7 233 aa2.53□□□□□ -2
CD44-234ENST00000531873 FAM72AQ5TYM5 149 aa2.53□□□□□ -2
CD44-234ENST00000531873 FAM72DQ6L9T8 149 aa2.53□□□□□ -2
CD44-234ENST00000531873 ERASQ7Z444 233 aa2.53□□□□□ -2
CD44-234ENST00000531873 FAM72BQ86X60 149 aa2.53□□□□□ -2
CD44-234ENST00000531873 ZNF573Q86YE8 665 aa2.53□□□□□ -2
CD44-234ENST00000531873 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 BANPQ8N9N5 519 aa2.53□□□□□ -2
CD44-234ENST00000531873 CNBD1Q8NA66 436 aa2.53□□□□□ -2
CD44-234ENST00000531873 CHDHQ8NE62 594 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 GMCL1P1Q8NEA9 526 aa2.53□□□□□ -2
CD44-234ENST00000531873 ZNF397Q8NF99 534 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 C11orf45Q8TAV5 145 aa2.53□□□□□ -2
CD44-234ENST00000531873 U2AF1L4Q8WU68 220 aaKnown RBP2.53□□□□□ -2
CD44-234ENST00000531873 HIST1H2ACQ93077 130 aa2.53□□□□□ -2
CD44-234ENST00000531873 NCLNQ969V3 563 aa2.53□□□□□ -2
CD44-234ENST00000531873 C11orf52Q96A22 123 aa2.53□□□□□ -2
CD44-234ENST00000531873 CCDC51Q96ER9 411 aa2.53□□□□□ -2
CD44-234ENST00000531873 INPP4AQ96PE3 977 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 F2RL3Q96RI0 385 aa2.53□□□□□ -2
CD44-234ENST00000531873 CLEC7AQ9BXN2 247 aa2.53□□□□□ -2
CD44-234ENST00000531873 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
CD44-234ENST00000531873 MTHFD2LQ9H903 347 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 SLC25A19Q9HC21 320 aa2.53□□□□□ -2
CD44-234ENST00000531873 PLCXD1Q9NUJ7 323 aa2.53□□□□□ -2
CD44-234ENST00000531873 ATAD3AQ9NVI7 634 aa2.53□□□□□ -2
CD44-234ENST00000531873 KLHL8Q9P2G9 620 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 ATXN10Q9UBB4 475 aa2.53□□□□□ -2
CD44-234ENST00000531873 KLK11Q9UBX7 282 aa2.53□□□□□ -2
CD44-234ENST00000531873 ERRFI1Q9UJM3 462 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 MGAT4BQ9UQ53 548 aa2.53□□□□□ -2
CD44-234ENST00000531873 PPP1R3CQ9UQK1 317 aa2.53□□□□□ -2
CD44-234ENST00000531873 TCF19Q9Y242 345 aa2.53□□□□□ -2
CD44-234ENST00000531873 SLC6A5Q9Y345 797 aa2.53□□□□□ -2
CD44-234ENST00000531873 MRPS18CQ9Y3D5 142 aaKnown RBP2.53□□□□□ -2
CD44-234ENST00000531873 ZNF175Q9Y473 711 aa2.53□□□□□ -2
CD44-234ENST00000531873 KLF2Q9Y5W3 355 aaPredicted RBP2.53□□□□□ -2
CD44-234ENST00000531873 CSNK1G3Q9Y6M4 447 aa2.53□□□□□ -2
CD44-234ENST00000531873 A0A1B0GUL7 405 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 LOC390937A0A1W2PQ73 354 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 MEIOCA2RUB1 952 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TCP10L2B9ZVM9 353 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 HHLA1C9JL84 531 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TNFSF12O43508 249 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms