RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 PROM1O43490 865 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 PRKRAO75569 313 aaKnown RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 KLHL2O95198 593 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 ALOX15P16050 662 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 MAGEA5P43359 124 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 DNASE1L1P49184 302 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 SERPINB8P50452 374 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 SLC7A5Q01650 507 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 CUL3Q13618 768 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 GTF2H2Q13888 395 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 GXYLT1Q4G148 440 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 MRM1Q6IN84 353 aaKnown RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 GTF2H2CQ6P1K8 395 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 KLC3Q6P597 504 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 ACAD11Q709F0 780 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 TRILQ7L0X0 811 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 GOLGA7Q7Z5G4 137 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 ST13P4Q8IZP2 240 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 SLC15A4Q8N697 577 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 GPR78Q96P69 363 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 SMC6Q96SB8 1091 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 PELOQ9BRX2 385 aaKnown RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 ZNF717Q9BY31 904 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 PNPLA3Q9NST1 481 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 TUBA8Q9NY65 449 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 ASB4Q9Y574 426 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 TNPO3Q9Y5L0 923 aaKnown RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 PHF3Q92576 2039 aaKnown RBP15.54■□□□□ 0.08
CPSF1-207ENST00000531727 HCFC1P51610 2035 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 A0A0A6YYD5 115 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 A0A1B0GVC2 190 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 EEDO75530 441 aaKnown RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 NADKO95544 446 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 GPR75O95800 540 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 IGFBP2P18065 325 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 POU3F2P20265 443 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 CAPN3P20807 821 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 TYK2P29597 1187 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 PHBP35232 272 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 BSGP35613 385 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 PIK3CGP48736 1102 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 NUP107P57740 925 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 HERVK_113P63132 956 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 ERVK-8P63133 956 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 TLE4Q04727 773 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 TFF3Q07654 80 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 PMPCAQ10713 525 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 UAP1Q16222 522 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 CPSF6Q16630 551 aaKnown RBP eCLIP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 SPRED3Q2MJR0 410 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 C8orf74Q6P047 294 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 METTL2BQ6P1Q9 378 aaKnown RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 LYPD8Q6UX82 237 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 L3MBTL4Q8NA19 623 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 OR5M9Q8NGP3 310 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 OR5M3Q8NGP4 307 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 WDR20Q8TBZ3 569 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 ERVK-6Q9BXR3 956 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 DDX31Q9H8H2 851 aaKnown RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 IPPKQ9H8X2 491 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 SH2D2AQ9NP31 389 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 PSD3Q9NYI0 1048 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 CPSF2Q9P2I0 782 aaKnown RBP15.53■□□□□ 0.08
CPSF1-207ENST00000531727 ERVK-19Q9WJR5 959 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 TACC2O95359 2948 aa15.53■□□□□ 0.08
CPSF1-207ENST00000531727 ATP6AP2A0A1C7CYW4 349 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 A0A1W2PR48 441 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 FAM90A27PA6NNH2 459 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 FOXE1O00358 373 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 AQP7O14520 342 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 TMPRSS11DO60235 418 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SUSD5O60279 629 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 ATP6AP2O75787 350 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 TOXO94900 526 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SIX3O95343 332 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 ALDOAP04075 364 aaKnown RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 CELA3AP09093 270 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 FAM58BPP0C7Q3 252 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 NR2F6P10588 404 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 ACVR2AP27037 513 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 PIGAP37287 484 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 KRTAP10-9P60411 292 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 CKAP4Q07065 602 aaKnown RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 TBL3Q12788 808 aaKnown RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 TECRLQ5HYJ1 363 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SLC22A10Q63ZE4 541 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 ADGRD1Q6QNK2 874 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 CYP20A1Q6UW02 462 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 RNF111Q6ZNA4 994 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SLC29A4Q7RTT9 530 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 CCDC71Q8IV32 467 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 DND1Q8IYX4 353 aaKnown RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 PAQR8Q8TEZ7 354 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SPACA9Q96E40 222 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 LRRC1Q9BTT6 524 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 CNPPD1Q9BV87 410 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 UCK2Q9BZX2 261 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 ACSS3Q9H6R3 686 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms