RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SLC7A5Q01650 507 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 TBL3Q12788 808 aaKnown RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 PCBP2Q15366 365 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 PIGGQ5H8A4 983 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 C18orf63Q68DL7 685 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 METTL2BQ6P1Q9 378 aaKnown RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 CYP20A1Q6UW02 462 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 ST13P4Q8IZP2 240 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 C17orf53Q8N3J3 647 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 TMEM251Q8N6I4 163 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 OR5M3Q8NGP4 307 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 PPWD1Q96BP3 646 aaKnown RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 SMC6Q96SB8 1091 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 CNPPD1Q9BV87 410 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 IPPKQ9H8X2 491 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 WDR41Q9HAD4 459 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 RYDENQ9NUL5 291 aaKnown RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 CPSF2Q9P2I0 782 aaKnown RBP19.32■□□□□ 0.68
SMPD1-204ENST00000530395 HRH3Q9Y5N1 445 aa19.32■□□□□ 0.68
SMPD1-204ENST00000530395 HCFC1P51610 2035 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 FIGNL2A6NMB9 653 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 OR10H2O60403 315 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 ZNF354AO60765 605 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-204ENST00000530395 IGHG3P01860 377 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 CCL3P10147 92 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 NR2F6P10588 404 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 MAGEA5P43359 124 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 DNASE1L1P49184 302 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 CUL3Q13618 768 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 CPSF6Q16630 551 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMPD1-204ENST00000530395 EMC4Q5J8M3 183 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 SLC29A4Q7RTT9 530 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 GOLGA7Q7Z5G4 137 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 NUDT13Q86X67 352 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 C9orf40Q8IXQ3 194 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 DND1Q8IYX4 353 aaKnown RBP19.31■□□□□ 0.68
SMPD1-204ENST00000530395 SLC15A4Q8N697 577 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 RNF6Q9Y252 685 aa19.31■□□□□ 0.68
SMPD1-204ENST00000530395 INTS1Q8N201 2190 aaKnown RBP19.3■□□□□ 0.68
SMPD1-204ENST00000530395 IQANK1A0A1B0GTG1 560 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 HMX2A2RU54 273 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 FAM90A27PA6NNH2 459 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 PROM1O43490 865 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 GPR75O95800 540 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 ARL1P40616 181 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-204ENST00000530395 HYAL4Q2M3T9 481 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 SPRED3Q2MJR0 410 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 GXYLT1Q4G148 440 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 SLC22A10Q63ZE4 541 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 RNF111Q6ZNA4 994 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 TRILQ7L0X0 811 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 ACBD4Q8NC06 268 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 LILRB4Q8NHJ6 448 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 SPACA9Q96E40 222 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-204ENST00000530395 GAL3ST4Q96RP7 486 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 VPS11Q9H270 941 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 ACSS3Q9H6R3 686 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 LDAHQ9H6V9 325 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 KCNJ16Q9NPI9 418 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 PNPLA3Q9NST1 481 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 ZDHHC18Q9NUE0 388 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 TUBA8Q9NY65 449 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-204ENST00000530395 PSD3Q9NYI0 1048 aa19.3■□□□□ 0.68
SMPD1-204ENST00000530395 MTRF1LQ9UGC7 380 aaKnown RBP19.3■□□□□ 0.68
SMPD1-204ENST00000530395 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.3■□□□□ 0.68
SMPD1-204ENST00000530395 A0A0A6YYD5 115 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ATP6AP2A0A1C7CYW4 349 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 LRRC14BA6NHZ5 514 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 HRKO00198 91 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 AQP7O14520 342 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 EEDO75530 441 aaKnown RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 PRKRAO75569 313 aaKnown RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ATP6AP2O75787 350 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 CLDN9O95484 217 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ALDOAP04075 364 aaKnown RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 FAM58BPP0C7Q3 252 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 CAPN3P20807 821 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ACVR2AP27037 513 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 BSGP35613 385 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 MAN2A2P49641 1150 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 NR0B1P51843 470 aaKnown RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 HERVK_113P63132 956 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ERVK-8P63133 956 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 TLE4Q04727 773 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 PMPCAQ10713 525 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ZNF791Q3KP31 576 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 MRM1Q6IN84 353 aaKnown RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 DGAT2L6Q6ZPD8 337 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 L3MBTL4Q8NA19 623 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 OR5M9Q8NGP3 310 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 RIT1Q92963 219 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ATP6V1E2Q96A05 226 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 LRRC1Q9BTT6 524 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ERVK-6Q9BXR3 956 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 ZNF717Q9BY31 904 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 EXO5Q9H790 373 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 DDX31Q9H8H2 851 aaKnown RBP19.29■□□□□ 0.68
SMPD1-204ENST00000530395 NINJ2Q9NZG7 142 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 TMCO1Q9UM00 188 aa19.29■□□□□ 0.68
SMPD1-204ENST00000530395 BOKQ9UMX3 212 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms