RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CPA2P48052 419 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 CDKN2DP55273 166 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 WNT3P56703 355 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 TIAL1Q01085 375 aaKnown RBP eCLIP8.26□□□□□ -1.09
VPS11-203ENST00000529545 DUSP8Q13202 625 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 RCAN2Q14206 197 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 SLBPQ14493 270 aaKnown RBP eCLIP8.26□□□□□ -1.09
VPS11-203ENST00000529545 ZNF791Q3KP31 576 aaPredicted RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 TBCELQ5QJ74 424 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 RBM20Q5T481 1227 aaKnown RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 ANKRD22Q5VYY1 191 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 NSUN5P2Q63ZY6 315 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 SYDE1Q6ZW31 735 aaPredicted RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 CXorf67Q86X51 503 aaPredicted RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 VWA5B2Q8N398 1253 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 RASGEF1CQ8N431 466 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 ZNF321PQ8N8H1 164 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 ART5Q96L15 291 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 Q96MF0 132 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 SERPINB12Q96P63 405 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 QRFPRQ96P65 431 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 TRIB1Q96RU8 372 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 TIMP4Q99727 224 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 PIP5K1AQ99755 562 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 CAPS2Q9BXY5 557 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 ROGDIQ9GZN7 287 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 PITHD1Q9GZP4 211 aaPredicted RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 AICDAQ9GZX7 198 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 TRMT1Q9NXH9 659 aaKnown RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 NDRG3Q9UGV2 375 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 GUCA1BQ9UMX6 200 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 NCKAP5O14513 1909 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 SH3D21A4FU49 640 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 CD8B2A6NJW9 211 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 CAPN14A8MX76 684 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 TP53I11O14683 189 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 ZNF354AO60765 605 aaPredicted RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 LDB3O75112 727 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 WDR47O94967 919 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 ETHE1O95571 254 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 TTC4O95801 387 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 C1QAP02745 245 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 CCDC175P0C221 793 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 PGAM1P18669 254 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 FPR1P21462 350 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 GCKP35557 465 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 MASP1P48740 699 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 HNMTP50135 292 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 AGFG1P52594 562 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 CRYZQ08257 329 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 BIKQ13323 160 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 TOMM20Q15388 145 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 ABHD17CQ6PCB6 329 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 POMZP3Q6PJE2 187 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 SLC29A4Q7RTT9 530 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 TAGAPQ8N103 731 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 SRFBP1Q8NEF9 429 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 ZNF721Q8TF20 911 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 DIO2Q92813 273 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 RBM18Q96H35 190 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 PDLIM5Q96HC4 596 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 SENP5Q96HI0 755 aaPredicted RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 DGAT2Q96PD7 388 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 SECISBP2Q96T21 854 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 CSF3RQ99062 836 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 NT5DC2Q9H857 520 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 LYRM4Q9HD34 91 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 SH2D2AQ9NP31 389 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 PPANQ9NQ55 473 aaKnown RBP8.25□□□□□ -1.09
VPS11-203ENST00000529545 VWA7Q9Y334 891 aa8.25□□□□□ -1.09
VPS11-203ENST00000529545 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 IQANK1A0A1B0GTG1 560 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 MBD3L4A6NDZ8 208 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 MBD3L3A6NE82 208 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 MBD3L5A6NJ08 208 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 LRRC3CA6NJW4 275 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 INAFM1C9JVW0 142 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 AHSGP02765 367 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 TMIGD3P0DMS9 266 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 KCNC1P48547 511 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 ZNF75DP51815 510 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 PLIN5Q00G26 463 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 ID2Q02363 134 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 CRYMQ14894 314 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 ADPRMQ3LIE5 342 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 VASNQ6EMK4 673 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 FAM45BPQ6NSW5 357 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 SBSNQ6UWP8 590 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 SLCO4C1Q6ZQN7 724 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 FRA10AC1Q70Z53 315 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 YTHDF3Q7Z739 585 aaKnown RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 CIARTQ8N365 385 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 OR10G3Q8NGC4 313 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 MBD3L2Q8NHZ7 208 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms