RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CCDC90B	Q9GZT6	254 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	TWSG1	Q9GZX9	223 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	XKR8	Q9H6D3	395 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	SP140L	Q9H930	580 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	FAM86C1	Q9NVL1	165 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	HRASLS2	Q9NWW9	162 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	SCN3B	Q9NY72	215 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	TRPS1	Q9UHF7	1281 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	ZNF232	Q9UNY5	417 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	RNF215	Q9Y6U7	377 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540		A0A096LPI6	279 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	KRT87P	A6NCN2	255 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR6C74	A6NCV1	312 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	ISM1	B1AKI9	464 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	PTGES3L	E9PB15	166 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CLDN9	O95484	217 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	PROS1	P07225	676 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	NPPB	P16860	134 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	HOXB9	P17482	250 aa	Predicted RBP	13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	IGFBP5	P24593	272 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CD40LG	P29965	261 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	HNF4A	P41235	474 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	MASP1	P48740	699 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	IRF8	Q02556	426 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	PRDX1	Q06830	199 aa	Known RBP	13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CD300C	Q08708	224 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	SLC5A12	Q1EHB4	618 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	C18orf21	Q32NC0	220 aa	Predicted RBP	13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	FAM174B	Q3ZCQ3	159 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	GGTA1P	Q4G0N0	100 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CACHD1	Q5VU97	1274 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	TUBA3E	Q6PEY2	450 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	SUSD1	Q6UWL2	747 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	TRIM46	Q7Z4K8	759 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	MILR1	Q7Z6M3	343 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	TBC1D19	Q8N5T2	526 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	DCBLD1	Q8N8Z6	715 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR2I1P	Q8NGU4	316 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CNIH3	Q8TBE1	160 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	SLC5A11	Q8WWX8	675 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	UBE2E3	Q969T4	207 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CD180	Q99467	661 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	EFCAB11	Q9BUY7	163 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	CPNE5	Q9HCH3	593 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	TAC3	Q9UHF0	121 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	PCDHB14	Q9Y5E9	798 aa		13.85	□□□□□ -0.19
NR1H3-231	ENST00000529540	PRAMEF33	A0A0G2JMD5	474 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540		A0A1W2PPV9	198 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	GSAP	A4D1B5	854 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	CLDN24	A6NM45	220 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	CDX4	O14627	284 aa	Predicted RBP	13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	XPNPEP2	O43895	674 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	SERPINA1	P01009	418 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	PGR	P06401	933 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	PCSK2	P16519	638 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	ST13	P50502	369 aa	Known RBP	13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	PPP5C	P53041	499 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	VAC14	Q08AM6	782 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	SF1	Q15637	639 aa	Known RBP	13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	PROX2	Q3B8N5	592 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	SPANXN4	Q5MJ08	99 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	CPZ	Q66K79	652 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	SFTPA2	Q8IWL1	248 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	LIX1	Q8N485	282 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	LMNTD1	Q8N9Z9	388 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR2A1	Q8NGT9	310 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	WDR48	Q8TAF3	677 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	RHBDD1	Q8TEB9	315 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	NUDT8	Q8WV74	236 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	STARD8	Q92502	1023 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	NCLN	Q969V3	563 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	REPS1	Q96D71	796 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	FAM120B	Q96EK7	910 aa	Known RBP	13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	ZDHHC12	Q96GR4	267 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR4K3	Q96R72	315 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	EPS8L2	Q9H6S3	715 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	PELI2	Q9HAT8	420 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	MRPS30	Q9NP92	439 aa	Known RBP	13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	VNN3	Q9NY84	501 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	ACTR10	Q9NZ32	417 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	EPHA6	Q9UF33	1036 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	OSGIN1	Q9UJX0	560 aa		13.84	□□□□□ -0.19
NR1H3-231	ENST00000529540	KNL1	Q8NG31	2342 aa		13.83	□□□□□ -0.19
NR1H3-231	ENST00000529540	CUL9	Q8IWT3	2517 aa		13.83	□□□□□ -0.19
NR1H3-231	ENST00000529540		E9PQ18	207 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	BTN3A3	O00478	584 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	PRICKLE3	O43900	615 aa	Predicted RBP	13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	MT-ND2	P03891	347 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	GP1BA	P07359	652 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	PRKACG	P22612	351 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	ALDH4A1	P30038	563 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	UGT2B10	P36537	528 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	MAP2K4	P45985	399 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	PPM1F	P49593	454 aa	Predicted RBP	13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	CLK3	P49761	638 aa	Known RBP	13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	ZNF33B	Q06732	778 aa		13.83	□□□□□ -0.2
NR1H3-231	ENST00000529540	ABHD18	Q0P651	414 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms