RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ANK3Q12955 4377 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 NBEAL2Q6ZNJ1 2754 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 DYSFO75923 2080 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 EXOC1LA0A1B0GW35 172 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ANKDD1BA6NHY2 528 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 MAGEB17A8MXT2 336 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 FAM227AF5H4B4 570 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ERI3O43414 337 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SEC24DO94855 1032 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SNRPAP09012 282 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SBK3P0C264 359 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 COL6A2P12110 1019 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ICAM2P13598 275 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 EPB42P16452 691 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 CNTFP26441 200 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 NOS3P29474 1203 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ALDH18A1P54886 795 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 PSMA6P60900 246 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 STXBP1P61764 594 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SKP1P63208 163 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 BTN3A2P78410 334 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 PLAURQ03405 335 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 MFAP5Q13361 173 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SLC29A2Q14542 456 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 PCBP2Q15366 365 aaKnown RBP eCLIP7.9□□□□□ -1.141e-8■■■□□ 16.9
SSBP3-212ENST00000528930 NSDHLQ15738 373 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 PFKFB4Q16877 469 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 PAGE2BQ5JRK9 111 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 IRAK1BP1Q5VVH5 260 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 CES4AQ5XG92 561 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 KLC3Q6P597 504 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ABHD17CQ6PCB6 329 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ISLR2Q6UXK2 745 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 TIFABQ6ZNK6 161 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 QSOX2Q6ZRP7 698 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 LINC00696Q6ZRV3 163 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 UBE3DQ7Z6J8 389 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 YTHDF3Q7Z739 585 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 GSPT2Q8IYD1 628 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SIRT6Q8N6T7 355 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 TEX9Q8N6V9 391 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 OR2L5Q8NG80 312 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 OR7G3Q8NG95 312 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 ZNF473Q8WTR7 871 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 CCT6BQ92526 530 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 F2RL3Q96RI0 385 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 NPLQ9BXD5 320 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 MS4A8Q9BY19 250 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 REXO4Q9GZR2 422 aaKnown RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 NECTIN3Q9NQS3 549 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 C19orf25Q9UFG5 118 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-212ENST00000528930 TRPS1Q9UHF7 1281 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 SH3BGRL2Q9UJC5 107 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 CLDN16Q9Y5I7 305 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 IKBKGQ9Y6K9 419 aa7.9□□□□□ -1.14
SSBP3-212ENST00000528930 CPAMD8Q8IZJ3 1885 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 IGKV3D-11A0A0A0MRZ8 115 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 TCRBV16S1A1N1A0A5B0 115 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 SERINC4A6NH21 518 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 H3BQF6 201 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 PRMT3O60678 531 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 B4GALT2O60909 372 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 RBP1P09455 135 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 RNH1P13489 461 aaKnown RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 GFAPP14136 432 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 JAK1P23458 1154 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 SSTR4P31391 388 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 HNRNPFP52597 415 aaKnown RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 DGKQP52824 942 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 PLA2G16P53816 162 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 GTF2H2Q13888 395 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 ABRAXAS2Q15018 415 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 HIST2H2ACQ16777 129 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 TSNAXIP1Q2TAA8 658 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 DEFB113Q30KQ7 82 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 SFT2D3Q587I9 215 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 LIPJQ5W064 366 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 PLAG1Q6DJT9 500 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 HIST2H2AA3Q6FI13 130 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 GRHL2Q6ISB3 625 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 H3F3CQ6NXT2 135 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 GTF2H2CQ6P1K8 395 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 METTL2BQ6P1Q9 378 aaKnown RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 MED27Q6P2C8 311 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 TRIM40Q6P9F5 258 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 PAPD4Q6PIY7 484 aaKnown RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 ZNF793Q6ZN11 406 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 GOLGA7Q7Z5G4 137 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 BTLAQ7Z6A9 289 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 CIARTQ8N365 385 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 RNF175Q8N4F7 328 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 PTGR2Q8N8N7 351 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 EIF1ADQ8N9N8 165 aaKnown RBP7.89□□□□□ -1.15
SSBP3-212ENST00000528930 TMEM52Q8NDY8 209 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 CATSPER1Q8NEC5 780 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 DNAJB14Q8TBM8 379 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 MZB1Q8WU39 189 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 HAS2Q92819 552 aa7.89□□□□□ -1.15
SSBP3-212ENST00000528930 UBE2E3Q969T4 207 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms