RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 RFPL3SP0C7P2 107 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 CTSSP25774 331 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 HOXC12P31275 282 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 GDF5P43026 501 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 SLC6A12P48065 614 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 FNTAP49354 379 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 TMED10P49755 219 aaKnown RBP10.62□□□□□ -0.71
CMTM1-211ENST00000528484 ID2Q02363 134 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 DUSP8Q13202 625 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 TSNQ15631 228 aaKnown RBP10.62□□□□□ -0.71
CMTM1-211ENST00000528484 TMEM35AQ53FP2 167 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 RNASEH2BQ5TBB1 312 aaKnown RBP10.62□□□□□ -0.71
CMTM1-211ENST00000528484 RNF111Q6ZNA4 994 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 ZNF662Q6ZS27 426 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 PACS2Q86VP3 889 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 RASGEF1CQ8N431 466 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 LRRN4CLQ8ND94 238 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 DIO2Q92813 273 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 RHBDF1Q96CC6 855 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 FBXL20Q96IG2 436 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 F2RL3Q96RI0 385 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 TRIB1Q96RU8 372 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 SMR3AQ99954 134 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
CMTM1-211ENST00000528484 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 FAM95CA0A1B0GW59 222 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 CD8B2A6NJW9 211 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 OR6C76A6NM76 312 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 ZNF354AO60765 605 aaPredicted RBP10.61□□□□□ -0.71
CMTM1-211ENST00000528484 STK16O75716 305 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 FBXO45P0C2W1 286 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 HIST1H1TP22492 207 aaPredicted RBP10.61□□□□□ -0.71
CMTM1-211ENST00000528484 ATP5A1P25705 553 aaKnown RBP10.61□□□□□ -0.71
CMTM1-211ENST00000528484 SERPINB1P30740 379 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 BUD31P41223 144 aaPredicted RBP10.61□□□□□ -0.71
CMTM1-211ENST00000528484 RAP1GDS1P52306 607 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 PGGT1BP53609 377 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 NRG3P56975 720 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 PPP2R2BQ00005 443 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 IRF8Q02556 426 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 TGFBIQ15582 683 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 PDK4Q16654 411 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 HLA-DQA1Q5Y7H0 255 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 NSUN5P2Q63ZY6 315 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 SCIMPQ6UWF3 145 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 SEM1Q6ZVN7 128 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 C9orf40Q8IXQ3 194 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 ACOT4Q8N9L9 421 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 NAXEQ8NCW5 288 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 LINC01560Q8TB33 94 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 TANKQ92844 425 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 ISL2Q96A47 359 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 DACH2Q96NX9 599 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 TIMP4Q99727 224 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 MAPKAP1Q9BPZ7 522 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 EPB41L4BQ9H329 900 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 RPF2Q9H7B2 306 aaKnown RBP10.61□□□□□ -0.71
CMTM1-211ENST00000528484 PLEKHF2Q9H8W4 249 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 SH2D2AQ9NP31 389 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 PRDM7Q9NQW5 492 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 NSMCE4AQ9NXX6 385 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 SLC17A6Q9P2U8 582 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 NDRG3Q9UGV2 375 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 PHF11Q9UIL8 331 aa10.61□□□□□ -0.71
CMTM1-211ENST00000528484 ANKRD33BA6NCL7 494 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 DNALI1O14645 258 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 SMPD2O60906 423 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 CDH16O75309 829 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 BANF1O75531 89 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 SNX4O95219 450 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 IL18BPO95998 194 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 C1QAP02745 245 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 PCNAP12004 261 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 ALOX15P16050 662 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 KRT15P19012 456 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 ZNF136P52737 540 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 CRYZQ08257 329 aaKnown RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 DOC2AQ14183 400 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 ZNF460Q14592 562 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 POU4F3Q15319 338 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 RPS6KA2Q15349 733 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 NTRK2Q16620 822 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 C6orf163Q5TEZ5 329 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 SYDE1Q6ZW31 735 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 GPSM1Q86YR5 675 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 ST13P4Q8IZP2 240 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 BBOF1Q8ND07 529 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 SMPDL3BQ92485 455 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 PIGTQ969N2 578 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 LRRC39Q96DD0 335 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 TSPAN17Q96FV3 270 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 MS4A14Q96JA4 679 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 RBM24Q9BX46 236 aaKnown RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 WWTR1Q9GZV5 400 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 PRDM14Q9GZV8 571 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 ACBD3Q9H3P7 528 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 CALHM2Q9HA72 323 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms