RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DAPK2Q9UIK4 370 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 NUDCQ9Y266 331 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 THSD7AQ9UPZ6 1657 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 OVOS2A0A0G2JMS6 1433 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 PCDH11YQ9BZA8 1340 aa5.2□□□□□ -1.58
PCF11-202ENST00000528336 RGPD5Q99666 1765 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 MEGF6O75095 1541 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 C13orf42A0A1B0GVH6 325 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 A0A1W2PPM1 405 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ANKRD61A6NGH8 418 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 FAM47DPA6NHR8 397 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ACOD1A6NK06 481 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ZNF716A6NP11 495 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 EDIL3O43854 480 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 SELENOFO60613 162 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 SURF6O75683 361 aaKnown RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 GAS8-AS1O95177 125 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 CLPTM1O96005 669 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 APOHP02749 345 aaPredicted RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 EDN1P05305 212 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ZNF735P0CB33 412 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ANXA8P13928 327 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 GNB3P16520 340 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 PCGF2P35227 344 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 MNDAP41218 407 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 TNFRSF17Q02223 184 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ZMYND11Q15326 602 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 TAF13Q15543 124 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 CLPPQ16740 277 aaPredicted RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 ITPRIPL2Q3MIP1 535 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 CCDC152Q4G0S7 254 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 MCMDC2Q4G0Z9 681 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 CEP85LQ5SZL2 805 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ANXA8L1Q5VT79 327 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 SLC22A9Q8IVM8 553 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 TTC5Q8N0Z6 440 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 EID3Q8N140 333 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 OR11H4Q8NGC9 324 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 ROBO4Q8WZ75 1007 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 PEX13Q92968 403 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 DTD2Q96FN9 168 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 LRR1Q96L50 414 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 PIGQQ9BRB3 760 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 URM1Q9BTM9 101 aaKnown RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 BARHL1Q9BZE3 327 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 GPR61Q9BZJ8 451 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 TMEM117Q9H0C3 514 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 GPN1Q9HCN4 374 aaPredicted RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 ZNF701Q9NV72 531 aaPredicted RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 INTS9Q9NV88 658 aaKnown RBP5.19□□□□□ -1.58
PCF11-202ENST00000528336 TNS2Q63HR2 1409 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 RGPD1P0DJD0 1748 aa5.19□□□□□ -1.58
PCF11-202ENST00000528336 PARP4Q9UKK3 1724 aaKnown RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 C15orf38-AP3S2A0A0A6YYH1 394 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 IGHV4-61A0A0C4DH41 118 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 A0A0U1RQS6 177 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 SERTM2A0A1B0GWG4 89 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 A0A1W2PN81 502 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 TLX2O43763 284 aaPredicted RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 RNASEH1O60930 286 aaKnown RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 NME6O75414 186 aaPredicted RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 SCGB2A1O75556 95 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 RHOBTB1O94844 696 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 IGHV4-59P01825 116 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 CSF2P04141 144 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 CCDC172P0C7W6 258 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 UBTFL6P0CB48 400 aaPredicted RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 HSPA8P11142 646 aaKnown RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 RALAP11233 206 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 MPZP25189 248 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 CHRNA7P36544 502 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 NKX2-1P43699 371 aaPredicted RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 CARD18P57730 90 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 PTENP60484 403 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 GPR17Q13304 367 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 SNTB2Q13425 540 aaKnown RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 HNRNPDQ14103 355 aaKnown RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 P2RY6Q15077 328 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 UGCGQ16739 394 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 UGP2Q16851 508 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 VWC2Q2TAL6 325 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 KRT39Q6A163 491 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 TMEM182Q6ZP80 229 aaPredicted RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 ARHGAP22Q7Z5H3 698 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 NUDT13Q86X67 352 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 CCDC83Q8IWF9 413 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 PHC2Q8IXK0 858 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 LINC00469Q8N7U9 141 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 ZNF321PQ8N8H1 164 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 ZNF248Q8NDW4 579 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 OR2T3Q8NH03 318 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 LILRB4Q8NHJ6 448 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 NCOA7Q8NI08 942 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 TMEM190Q8WZ59 177 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 NT5C3BQ969T7 300 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 THOC1Q96FV9 657 aaKnown RBP5.18□□□□□ -1.58
PCF11-202ENST00000528336 ATP6V1G3Q96LB4 118 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 KLHL5Q96PQ7 755 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 GPA33Q99795 319 aa5.18□□□□□ -1.58
PCF11-202ENST00000528336 CCT7Q99832 543 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms