RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 MKS1Q9NXB0 559 aa11.29□□□□□ -0.6
SDHD-205ENST00000528048 YARS2Q9Y2Z4 477 aaKnown RBP11.29□□□□□ -0.6
SDHD-205ENST00000528048 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
SDHD-205ENST00000528048 ATMQ13315 3056 aa11.29□□□□□ -0.6
SDHD-205ENST00000528048 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
SDHD-205ENST00000528048 GNG14A0A1W2PPG7 69 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 C1orf226A1L170 272 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 PGRMC2O15173 223 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 MAN1A2O60476 641 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 ITGA10O75578 1167 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 CHEK2O96017 543 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 UROSP10746 265 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 GNLYP22749 145 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 SSR4P51571 173 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 XKP51811 444 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
SDHD-205ENST00000528048 TBL3Q12788 808 aaKnown RBP11.28□□□□□ -0.6
SDHD-205ENST00000528048 ZNF267Q14586 743 aaPredicted RBP11.28□□□□□ -0.6
SDHD-205ENST00000528048 NR6A1Q15406 480 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 SPIN4Q56A73 249 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 FHL5Q5TD97 284 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 SLC25A25Q6KCM7 469 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 SCIMPQ6UWF3 145 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 DNAJB8Q8NHS0 232 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 SLC2A12Q8TD20 617 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 TCP10LQ8TDR4 215 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 CHTF18Q8WVB6 975 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 FAR1Q8WVX9 515 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 KCNA7Q96RP8 456 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
SDHD-205ENST00000528048 KLHL1Q9NR64 748 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 OLAHQ9NV23 265 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 ERVK-11Q9UQG0 969 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 PCDHGB6Q9Y5F9 930 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 ZNF780BQ9Y6R6 833 aa11.28□□□□□ -0.6
SDHD-205ENST00000528048 KALRNO60229 2985 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 SERTM1A2A2V5 107 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 ANKUB1A6NFN9 424 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 GOLGA6L10A6NI86 522 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 WASHC1A8K0Z3 465 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 SLC28A1O00337 649 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 UBFD1O14562 309 aaKnown RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 PRKRAO75569 313 aaKnown RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 SP1P08047 785 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 PORP16435 677 aaPredicted RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 NT5EP21589 574 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 SERPINB3P29508 390 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 ALDH3A1P30838 453 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 GALNSP34059 522 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 TRHRP34981 398 aaPredicted RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 ALDH9A1P49189 494 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 ST13P50502 369 aaKnown RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 GPR143P51810 404 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 RNF4P78317 190 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 HMGCS1Q01581 520 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 ZNF844Q08AG5 666 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 SLC29A4Q7RTT9 530 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 GPALPP1Q8IXQ4 340 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 OR8K3Q8NH51 312 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 ASB15Q8WXK1 588 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 TM4SF18Q96CE8 201 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 NPAS2Q99743 824 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 CNPPD1Q9BV87 410 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 ACPTQ9BZG2 426 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 SHCBP1LQ9BZQ2 653 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 STMN4Q9H169 189 aaPredicted RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 TIMMDC1Q9NPL8 285 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 PFDN4Q9NQP4 134 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 GIMAP4Q9NUV9 329 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 TEX10Q9NXF1 929 aaPredicted RBP11.27□□□□□ -0.61
SDHD-205ENST00000528048 MYOTQ9UBF9 498 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 MCM8Q9UJA3 840 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 PCDHA9Q9Y5H5 950 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 PCSK5Q92824 1860 aa11.27□□□□□ -0.61
SDHD-205ENST00000528048 PCM1Q15154 2024 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 SNRNP200O75643 2136 aaKnown RBP11.26□□□□□ -0.61
SDHD-205ENST00000528048 A8MVJ9 347 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 WWP2O00308 870 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 AZIN1O14977 448 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 RGS14O43566 566 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 PCDH7O60245 1069 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 NPHS1O60500 1241 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 ERAL1O75616 437 aaKnown RBP11.26□□□□□ -0.61
SDHD-205ENST00000528048 SLC25A12O75746 678 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 CBX6O95503 412 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 DDAH2O95865 285 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 ANXA4P09525 319 aaPredicted RBP11.26□□□□□ -0.61
SDHD-205ENST00000528048 NEFHP12036 1026 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 EDN3P14138 238 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 DRD2P14416 443 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 CHN1P15882 459 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 CSNK2A2P19784 350 aaPredicted RBP11.26□□□□□ -0.61
SDHD-205ENST00000528048 GSTM5P46439 218 aa11.26□□□□□ -0.61
SDHD-205ENST00000528048 HTR6P50406 440 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms