RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GTF2H2CQ6P1K8 395 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GK5Q6ZS86 529 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GDF7Q7Z4P5 450 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 MYLK4Q86YV6 388 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 ST13P4Q8IZP2 240 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 ZNF721Q8TF20 911 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 ISL2Q96A47 359 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 PGM2Q96G03 612 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GPR78Q96P69 363 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 FAM173AQ9BQD7 235 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 DDX31Q9H8H2 851 aaKnown RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 IPPKQ9H8X2 491 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 LYARQ9NX58 379 aaKnown RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 TACC2O95359 2948 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 A0A1B0GTH9 108 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 ADAM10O14672 748 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 PROM1O43490 865 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 FGF17O60258 216 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 KRT38O76015 456 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 OR6B1O95007 311 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 CLDN9O95484 217 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 ETHE1O95571 254 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 IGKV3-11P04433 115 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 INHBAP08476 426 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 MYZAPP0CAP1 466 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 ALOX15P16050 662 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 SOX3P41225 446 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 GPR85P60893 370 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 HSF1Q00613 529 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 IRF9Q00978 393 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 TNFRSF17Q02223 184 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 PLGLB1Q02325 96 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 IFFO1Q0D2I5 559 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 DDX39BQ13838 428 aaKnown RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 TSNAXIP1Q2TAA8 658 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 MRM1Q6IN84 353 aaKnown RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 FGD2Q7Z6J4 655 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 RIBC1Q8N443 379 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 OR2M7Q8NG81 312 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 WDR20Q8TBZ3 569 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 SLC22A8Q8TCC7 542 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 FBXL20Q96IG2 436 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 MTERF1Q99551 399 aaKnown RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 STMN4Q9H169 189 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 VPS11Q9H270 941 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 TP63Q9H3D4 680 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 LIN28AQ9H9Z2 209 aaKnown RBP13.15□□□□□ -0.3
CAPN1-212ENST00000527887 SACM1LQ9NTJ5 587 aa13.15□□□□□ -0.3
CAPN1-212ENST00000527887 ADGRG4Q8IZF6 3080 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 OR14I1A6ND48 311 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 HMGB1P1B2RPK0 211 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 STX16-NPEPL1H3BU86 382 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 SAP18O00422 153 aaKnown RBP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 STX16O14662 325 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 SEMA3DO95025 777 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 GPR75O95800 540 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 P04436 131 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 TPOP07202 933 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 PRF1P14222 555 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 MAGEA12P43365 314 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 RPS13P62277 151 aaKnown RBP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 FOLH1Q04609 750 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF844Q08AG5 666 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 CPSF6Q16630 551 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 SPRED3Q2MJR0 410 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 TECRLQ5HYJ1 363 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 GOLGA7Q7Z5G4 137 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 OR52N2Q8NGI0 321 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 CA5BP1Q8WTZ4 195 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 ASB5Q8WWX0 329 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 ATP6V1E2Q96A05 226 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 MRRFQ96E11 262 aaKnown RBP13.14□□□□□ -0.31
CAPN1-212ENST00000527887 SERPINI1Q99574 410 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 SPOCK3Q9BQ16 436 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 NTMT1Q9BV86 223 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 IL1RL2Q9HB29 575 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 ZNF180Q9UJW8 692 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 ATG4BQ9Y4P1 393 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 ASB4Q9Y574 426 aa13.14□□□□□ -0.31
CAPN1-212ENST00000527887 A0A0A6YYD5 115 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 OR6C76A6NM76 312 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 SH3BGRLO75368 114 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-212ENST00000527887 FAM58BPP0C7Q3 252 aa13.13□□□□□ -0.31
CAPN1-212ENST00000527887 BSGP35613 385 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms