RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 KREMEN2Q8NCW0 462 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 OR4D6Q8NGJ1 314 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 PAQR8Q8TEZ7 354 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 HPSE2Q8WWQ2 592 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 MAL2Q969L2 176 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 LRRC46Q96FV0 321 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 UHRF2Q96PU4 802 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 CD180Q99467 661 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 LGMNQ99538 433 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 MYOCQ99972 504 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 ORAI3Q9BRQ5 295 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 ULBP1Q9BZM6 244 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 ASB7Q9H672 318 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 GPRC5CQ9NQ84 441 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 SDHAF2Q9NX18 166 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 CXXC1Q9P0U4 656 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-216ENST00000527467 USP36Q9P275 1121 aaKnown RBP6.96□□□□□ -1.3
CTNND1-216ENST00000527467 NLKQ9UBE8 527 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 CLIC1O00299 241 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 MPPED1O15442 326 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 IL1AP01583 271 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 CFIP05156 583 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 MAPTP10636 758 aaKnown RBP6.96□□□□□ -1.3
CTNND1-216ENST00000527467 ALAS2P22557 587 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 IDH3AP50213 366 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 TAGLNQ01995 201 aaKnown RBP6.96□□□□□ -1.3
CTNND1-216ENST00000527467 TLE4Q04727 773 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 SULT2A1Q06520 285 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 ARL6IP1Q15041 203 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 PDGFRLQ15198 375 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 TPGS2Q68CL5 300 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 TNFAIP8L2Q6P589 184 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-216ENST00000527467 KIAA1324Q6UXG2 1013 aaKnown RBP6.96□□□□□ -1.3
CTNND1-216ENST00000527467 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 PRELID2Q8N945 189 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 ADIPOR1Q96A54 375 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 RSPRY1Q96DX4 576 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 SDSLQ96GA7 329 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 RBP7Q96R05 134 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 TBL1XR1Q9BZK7 514 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 SLC38A1Q9H2H9 487 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 RXFP3Q9NSD7 469 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 KCNIP1Q9NZI2 227 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 PADI3Q9ULW8 664 aa6.96□□□□□ -1.3
CTNND1-216ENST00000527467 CASTOR2A6NHX0 329 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 ANKRD28O15084 1053 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 NPHS1O60500 1241 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 TBX10O75333 385 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 RPP40O75818 363 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 FGF18O76093 207 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 CXCL8P10145 99 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 RAC2P15153 192 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 CPN1P15169 458 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 IDSP22304 550 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 S100A7P31151 101 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 RAB28P51157 221 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 RABGGTBP53611 331 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 PTTG1IPP53801 180 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 ST3GAL3Q11203 375 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 SPATS1Q496A3 300 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 TMEM164Q5U3C3 297 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 DPY19L2P1Q6NXN4 242 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 ZNF585AQ6P3V2 769 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 DBX2Q6ZNG2 339 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 P4HA3Q7Z4N8 544 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 DNAJC22Q8N4W6 341 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 GDPD1Q8N9F7 314 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 KIAA0895Q8NCT3 520 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 OR6N1Q8NGY5 312 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 LILRB4Q8NHJ6 448 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 CORO2AQ92828 525 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 INPP4AQ96PE3 977 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 HAPLN3Q96S86 360 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 GON7Q9BXV9 100 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 TM6SF2Q9BZW4 377 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 AIG1Q9NVV5 245 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 P2RX2Q9UBL9 471 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 AGO1Q9UL18 857 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 HEBP2Q9Y5Z4 205 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 COLEC10Q9Y6Z7 277 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 LRRC72A6NJI9 287 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 C9JVG2 144 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 UBFD1O14562 309 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 TRUB2O95900 331 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 AMY2AP04746 511 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 NR4A2P43354 598 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 STT3AP46977 705 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 SOX2P48431 317 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 PTH2RP49190 550 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 CLCN3P51790 818 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 RIDAP52758 137 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 UBA52P62987 128 aaKnown RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 ATPAF1Q5TC12 328 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 AGAP7PQ5VUJ5 663 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 KCTD18Q6PI47 426 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-216ENST00000527467 CERS6Q6ZMG9 384 aa6.95□□□□□ -1.3
CTNND1-216ENST00000527467 NAA40Q86UY6 237 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms