RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RFX4Q33E94 735 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF260Q3ZCT1 412 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC36A3Q495N2 470 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ATP13A5Q4VNC0 1218 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ACER2Q5QJU3 275 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RBM48Q5RL73 367 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NXNL2Q5VZ03 156 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ARL6IP4Q66PJ3 421 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PLA2G4FQ68DD2 849 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 XAF1Q6GPH4 301 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PRR5LQ6MZQ0 368 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC18B1Q6NT16 456 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CDC73Q6P1J9 531 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PMF1Q6P1K2 205 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MSANTD2Q6P1R3 559 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ZCCHC12Q6PEW1 402 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 DARS2Q6PI48 645 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C16orf89Q6UX73 402 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC36A4Q6YBV0 504 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM92BQ6ZTR7 304 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TRILQ7L0X0 811 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 COPS6Q7L5N1 327 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SHFQ7M4L6 423 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC16A13Q7RTY0 426 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 DCXRQ7Z4W1 244 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NECAB2Q7Z6G3 386 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ADGRD2Q7Z7M1 963 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC13A5Q86YT5 568 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SNX29P2Q8IUI4 249 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC35F3Q8IY50 421 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ADGRF4Q8IZF3 695 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C8orf59Q8N0T1 100 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OR8H3Q8N146 312 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SYNPOQ8N3V7 929 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C9orf62Q8N4C0 152 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SPATA6LQ8N4H0 392 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF561Q8N587 486 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C12orf45Q8N5I9 185 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C8orf58Q8NAV2 365 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NAXEQ8NCW5 288 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ZMIZ2Q8NF64 920 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 Q8NFD4 153 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OR5T1Q8NG75 326 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OR7A2PQ8NGA2 310 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OR13J1Q8NGT2 312 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MOSPD2Q8NHP6 518 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NDNFQ8TB73 568 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MAFIPQ8WZ33 124 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MUL1Q969V5 352 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TMBIM1Q969X1 311 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MYLPFQ96A32 169 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 LRIG1Q96JA1 1093 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 LINC00052Q96N35 136 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF385AQ96PM9 386 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 KCNA7Q96RP8 456 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 WDR77Q9BQA1 342 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 INPP5KQ9BT40 448 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FUNDC2Q9BWH2 189 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 BBS2Q9BXC9 721 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C1QTNF1Q9BXJ1 281 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 QTRT1Q9BXR0 403 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ACTR6Q9GZN1 396 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NXF2Q9GZY0 626 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 LHPPQ9H008 270 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SPRTNQ9H040 489 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 GAL3ST2Q9H3Q3 398 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM83DQ9H4H8 585 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 KLHL31Q9H511 634 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 GREM2Q9H772 168 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SEPSECSQ9HD40 501 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TREM1Q9NP99 234 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NT5MQ9NPB1 228 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 IL26Q9NPH9 171 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NANSQ9NR45 359 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 C1orf112Q9NSG2 853 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM49BQ9NUQ9 324 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CFAP97Q9P2B7 532 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SPASTQ9UBP0 616 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 UBQLN2Q9UHD9 624 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SHOC2Q9UQ13 582 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 POLR3HQ9Y535 204 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 HSPB11Q9Y547 144 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PCDHB7Q9Y5E2 793 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PCDHGA1Q9Y5H4 931 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ALG5Q9Y673 324 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 V9GYQ6 96 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SETBP1Q9Y6X0 1596 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 YLPM1P49750 1951 aaKnown RBP3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 ALKQ9UM73 1620 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 DENND4AQ7Z401 1863 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 NFASCO94856 1347 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A0D9SFI3 127 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A1B0GVC2 190 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A1W2PN81 502 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 CCDC154A6NI56 674 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 OR6C75A6NL08 312 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 IQCF5A8MTL0 148 aa3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 A8MV72 311 aaPredicted RBP3.52□□□□□ -1.85
CLNS1A-209ENST00000527299 H7C4K7 107 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms