RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 C9orf64Q5T6V5 341 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 SHEQ5VZ18 495 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 Q6ZS92 163 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 C1orf186Q6ZWK4 172 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ARHGAP22Q7Z5H3 698 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 P2RY8Q86VZ1 359 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 HORMAD1Q86X24 394 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 GKN2Q86XP6 184 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TMEM25Q86YD3 366 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 BBS7Q8IWZ6 715 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 BLIDQ8IZY5 108 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CRYBG2Q8N1P7 616 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 PPHLN1Q8NEY8 458 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 ANKRD20A12PQ8NF67 263 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MYRIPQ8NFW9 859 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 OR14L1PQ8NHC6 308 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 FIBINQ8TAL6 211 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 FGFBP3Q8TAT2 258 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 KIAA1524Q8TCG1 905 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 PPP4R1Q8TF05 950 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 UBE2Q2Q8WVN8 375 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TMEM158Q8WZ71 300 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 STARD8Q92502 1023 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TAF4BQ92750 862 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 C18orf25Q96B23 403 aaPredicted RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 NTNG2Q96CW9 530 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 RRNAD1Q96FB5 475 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 SLC47A1Q96FL8 570 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ZNF274Q96GC6 653 aaPredicted RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 APOPT1Q96IL0 206 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 EGLN2Q96KS0 407 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CCDC114Q96M63 670 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 SLC22A12Q96S37 553 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 IL12RB2Q99665 862 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 PIP5K1AQ99755 562 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CCDC3Q9BQI4 270 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 SYT15Q9BQS2 421 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 PCGF1Q9BSM1 259 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MCRIP2Q9BUT9 160 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 TRIM9Q9C026 710 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 LAT2Q9GZY6 243 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CHRNA10Q9GZZ6 450 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 RAB33BQ9H082 229 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 LRRN3Q9H3W5 708 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MAGIXQ9H6Y5 334 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 GPN2Q9H9Y4 310 aaPredicted RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 SYTL2Q9HCH5 934 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 OLFML3Q9NRN5 406 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 PPP1R14DQ9NXH3 145 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 FBXL12Q9NXK8 326 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 STMN3Q9NZ72 180 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CGNQ9P2M7 1197 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 COPG2Q9UBF2 871 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TUBGCP4Q9UGJ1 667 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 SARDHQ9UL12 918 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 KCNJ14Q9UNX9 436 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 HS3ST2Q9Y278 367 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TP53TG5Q9Y2B4 290 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CLIC4Q9Y696 253 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TGP01266 2768 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 NBEAL2Q6ZNJ1 2754 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 DOCK5Q9H7D0 1870 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 PCLOQ9Y6V0 5065 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 UNC13CQ8NB66 2214 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ZANQ9Y493 2812 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 RYR1P21817 5038 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 OBSL1O75147 1896 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 A0A1W2PPR1 153 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 C1orf226A1L170 272 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EPM2AB3EWF7 344 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 ANKRD66B4E2M5 251 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 GPR89AB7ZAQ6 455 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 WASH3PC4AMC7 463 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 F8VP50 259 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 I3L4J1 428 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EIF3FO00303 357 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 E2F3O00716 465 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 CLIC2O15247 247 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 STX6O43752 255 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 SLC37A4O43826 429 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 NEMFO60524 1076 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 USO1O60763 962 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 SHOX2O60902 331 aaPredicted RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 TDP2O95551 362 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 EML2O95834 649 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 F9P00740 461 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 NGFP01138 241 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 RPN1P04843 607 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 PYGLP06737 847 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 LIPFP07098 398 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 OR4Q2P0C623 313 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 GPR89BP0CG08 455 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 CXCL8P10145 99 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 RALAP11233 206 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 P4HA1P13674 534 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 POLR2EP19388 210 aaKnown RBP1.42□□□□□ -2.18
CD44-212ENST00000524922 TCN2P20062 427 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 CYP2F1P24903 491 aa1.42□□□□□ -2.18
CD44-212ENST00000524922 OAS2P29728 719 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms