RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FBXO25Q8TCJ0 367 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 BLOC1S5Q8TDH9 187 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GRK7Q8WTQ7 553 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SECTM1Q8WVN6 248 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 NCSTNQ92542 709 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ART4Q93070 314 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TCEAL3Q969E4 200 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CENPTQ96BT3 561 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 RMDN1Q96DB5 314 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 DTD2Q96FN9 168 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PPP1R16AQ96I34 528 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 BMFQ96LC9 184 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 UHRF2Q96PU4 802 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TRAPPC9Q96Q05 1148 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 EPYCQ99645 322 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ELAC2Q9BQ52 826 aaKnown RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ABCG8Q9H221 673 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TCEAL2Q9H3H9 227 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SUDS3Q9H7L9 328 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC40Q9H9A6 602 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 EPB41L5Q9HCM4 733 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 GDF3Q9NR23 364 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 EIF2B3Q9NR50 452 aaKnown RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CHRAC1Q9NRG0 131 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SMYD2Q9NRG4 433 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 HOMER3Q9NSC5 361 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TREX1Q9NSU2 369 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 IL17CQ9P0M4 197 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 LRFN1Q9P244 771 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 ASIC3Q9UHC3 531 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 KCND3Q9UK17 655 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SCML1Q9UN30 329 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 AAR2Q9Y312 384 aaKnown RBP2.84□□□□□ -1.95
CSDE1-208ENST00000524652 PAM16Q9Y3D7 125 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 CLDN16Q9Y5I7 305 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 TEX264Q9Y6I9 313 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 SCN2AQ99250 2005 aa2.84□□□□□ -1.95
CSDE1-208ENST00000524652 DSPP15924 2871 aaKnown RBP2.84□□□□□ -1.96
CSDE1-208ENST00000524652 SPTBP11277 2137 aa2.84□□□□□ -1.96
CSDE1-208ENST00000524652 BOD1L1Q8NFC6 3051 aa2.84□□□□□ -1.96
CSDE1-208ENST00000524652 NBPF19A0A087WUL8 3843 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TRBV5-4A0A0C4DH59 114 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TMEM202A6NGA9 273 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ERI2A8K979 691 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 AGAP14A8MT82 685 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 GOLGA8KD6RF30 607 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 E7EVH7 732 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 GOLGA8TH3BQL2 631 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 H7C0S8 307 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SCAMP1O15126 338 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CASC3O15234 703 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SLC31A1O15431 190 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SLC7A4O43246 635 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A9O60656 530 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 LMX1BO60663 402 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RNASEH1O60930 286 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF217O75362 1048 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TM7SF2O76062 418 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CBX6O95503 412 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 GAS8O95995 478 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 EPOP01588 193 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PCCBP05166 539 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RHOXF2BP0C7M4 288 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DHRS4L1P0CG22 281 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF30P17039 623 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A6P19224 532 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A1P22309 533 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A4P22310 534 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 HNRNPA2B1P22626 353 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DGKAP23743 735 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SSTR1P30872 391 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 FOXN2P32314 431 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A3P35503 534 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 UGT1A5P35504 534 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ACTN2P35609 894 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 HMGCLP35914 325 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 TRIM23P36406 574 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 NBL1P41271 181 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ELK3P41970 407 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ARCN1P48444 511 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SPINT3P49223 89 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DHPSP49366 369 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CSNK1EP49674 416 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 DRG2P55039 364 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PLTPP55058 493 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 GPX6P59796 221 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PFN3P60673 137 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RPL26P61254 145 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 VSNL1P62760 191 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RPS21P63220 83 aaKnown RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 RAD51Q06609 339 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ARL16Q0P5N6 197 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 ELP6Q0PNE2 266 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 CDH17Q12864 832 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PDE1CQ14123 709 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 SIM2Q14190 667 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 PRPSAP1Q14558 356 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 MORF4L2Q15014 288 aa2.83□□□□□ -1.96
CSDE1-208ENST00000524652 EFTUD2Q15029 972 aaKnown RBP eCLIP2.83□□□□□ -1.96
CSDE1-208ENST00000524652 WSCD2Q2TBF2 565 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms