RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NARFQ9UHQ1 456 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 TRMT6Q9UJA5 497 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 EPRSP07814 1512 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 RPGRIP1LQ68CZ1 1315 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 EHBP1L1Q8N3D4 1523 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 TCF20Q9UGU0 1960 aaKnown RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 MEX3AA1L020 520 aaKnown RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 MACROD2A1Z1Q3 448 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 IGLON5A6NGN9 336 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 ARHGAP42A6NI28 874 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CCDC69A6NI79 296 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 SLC9B1P1A6NJY1 282 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 SHISA7A6NL88 538 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 FBP2O00757 339 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 SOCS3O14543 225 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 ZNF749O43361 778 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 HPRP00739 348 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CGAP01215 116 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 APRTP07741 180 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 HIST1H2AGP0C0S8 130 aaPredicted RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 ZNF883P0CG24 379 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 GPX3P22352 226 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CALML3P27482 149 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 ID1P41134 155 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 ACADSBP45954 432 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 SLC1A6P48664 564 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CNN1P51911 297 aaKnown RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 HNRNPFP52597 415 aaKnown RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 SLC12A3P55017 1021 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CASP9P55211 416 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 MFGE8Q08431 387 aaPredicted RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 FCHO2Q0JRZ9 810 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 KNOP1Q1ED39 458 aaKnown RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 WSCD2Q2TBF2 565 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CCDC40Q4G0X9 1142 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 GPAT3Q53EU6 434 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 MUC21Q5SSG8 566 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 RAB12Q6IQ22 244 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 RABEPKQ7Z6M1 372 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 KCNMB4Q86W47 210 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 GVQW1Q8N7I0 195 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CCNYQ8ND76 341 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 OR4L1Q8NH43 312 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 EXOC6Q8TAG9 804 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 C11orf45Q8TAV5 145 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 URGCPQ8TCY9 931 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 HIST1H2ACQ93077 130 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 MRPL24Q96A35 216 aaKnown RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 SLCO4A1Q96BD0 722 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 C16orf58Q96GQ5 468 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 RAB40CQ96S21 281 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 ATF6BQ99941 703 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 PARLQ9H300 379 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 ELL3Q9HB65 397 aaPredicted RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 IL1RAPQ9NPH3 570 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 GTSE1Q9NYZ3 720 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 TRIM10Q9UDY6 481 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 NIP7Q9Y221 180 aaKnown RBP eCLIP3.26□□□□□ -1.89
SKP1-212ENST00000523966 TROQ12816 1431 aaPredicted RBP3.26□□□□□ -1.89
SKP1-212ENST00000523966 MYOM3Q5VTT5 1437 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 MIA2Q96PC5 1412 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 UACAQ9BZF9 1416 aa3.26□□□□□ -1.89
SKP1-212ENST00000523966 CFAP43Q8NDM7 1665 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 NUP153P49790 1475 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 NCOA2Q15596 1464 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 PLB1Q6P1J6 1458 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 IGLV4-3A0A075B6K6 122 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 TRGV8A0A0C4DH27 118 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 IGHV3-20A0A0C4DH32 117 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 IGHV3-38A0A0C4DH36 116 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 MEI4A8MW99 385 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 G3V2L1 256 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 TLR4O00206 839 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 NTN3O00634 580 aaPredicted RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 NME2P1O60361 137 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 CSDE1O75534 798 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 BCAS2O75934 225 aaPredicted RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 TXNDC12O95881 172 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 GSTA1P08263 222 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 GLRA1P23415 457 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 NUMBP49757 651 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 SRP54P61011 504 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 P2RY14Q15391 338 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 NKAIN2Q5VXU1 208 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 CWC27Q6UX04 472 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 Q6ZRG5 221 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 ASRGL1Q7L266 308 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 ZNF440Q8IYI8 595 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 GPATCH11Q8N954 259 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 FBXO25Q8TCJ0 367 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 U2AF1L4Q8WU68 220 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 CHPT1Q8WUD6 406 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 ZNF689Q96CS4 500 aaPredicted RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 DTD2Q96FN9 168 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 NSMCE2Q96MF7 247 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 RUNDC3BQ96NL0 473 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 VGLL1Q99990 258 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 SPXQ9BT56 116 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 CABLES2Q9BTV7 478 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms