RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 AGFG1P52594 562 aaKnown RBP23.83■■□□□ 1.41
PVT1-219ENST00000523427 DUSP8Q13202 625 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 MORF4L2Q15014 288 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 LYPD8Q6UX82 237 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 PAMR1Q6UXH9 720 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 CAPN12Q6ZSI9 719 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 LRRC25Q8N386 305 aaPredicted RBP23.83■■□□□ 1.41
PVT1-219ENST00000523427 WFDC11Q8NEX6 87 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 DERL2Q9GZP9 239 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 EPB41L4BQ9H329 900 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 ACKR4Q9NPB9 350 aa23.83■■□□□ 1.41
PVT1-219ENST00000523427 MTRF1LQ9UGC7 380 aaKnown RBP23.83■■□□□ 1.41
PVT1-219ENST00000523427 TUBAL3A6NHL2 446 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 PHGDHO43175 533 aaKnown RBP23.82■■□□□ 1.4
PVT1-219ENST00000523427 PRKRAO75569 313 aaKnown RBP23.82■■□□□ 1.4
PVT1-219ENST00000523427 RAF1P04049 648 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 FOSL1P15407 271 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 ARL4CP56559 192 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 HERVK_113P63132 956 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 ERVK-8P63133 956 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 LTBQ06643 244 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 SLAMF1Q13291 335 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 LAPTM5Q13571 262 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 ACSF3Q4G176 576 aaPredicted RBP23.82■■□□□ 1.4
PVT1-219ENST00000523427 TMEM64Q6YI46 380 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 SLC35F6Q8N357 371 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 FBXO36Q8NEA4 188 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 LINC01560Q8TB33 94 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 ZNF473Q8WTR7 871 aaKnown RBP23.82■■□□□ 1.4
PVT1-219ENST00000523427 ERVK-6Q9BXR3 956 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 OR51B5Q9H339 312 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 RHOJQ9H4E5 214 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 CNIH4Q9P003 139 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 ERVK-19Q9WJR5 959 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 MTO1Q9Y2Z2 717 aaKnown RBP23.82■■□□□ 1.4
PVT1-219ENST00000523427 ARHGAP21Q5T5U3 1957 aa23.82■■□□□ 1.4
PVT1-219ENST00000523427 IQANK1A0A1B0GTG1 560 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 IGKV3-11P04433 115 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 CCDC166P0CW27 439 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 GGT5P36269 586 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 PDIA2Q13087 525 aaKnown RBP23.81■■□□□ 1.4
PVT1-219ENST00000523427 DDX39BQ13838 428 aaKnown RBP23.81■■□□□ 1.4
PVT1-219ENST00000523427 ZNF267Q14586 743 aaPredicted RBP23.81■■□□□ 1.4
PVT1-219ENST00000523427 FASTKD3Q14CZ7 662 aaKnown RBP23.81■■□□□ 1.4
PVT1-219ENST00000523427 OR4D1Q15615 310 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 SULT1C3Q6IMI6 304 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 SLC29A4Q7RTT9 530 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 CAMKMTQ7Z624 323 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 RNF175Q8N4F7 328 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 LRRC39Q96DD0 335 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 WDR34Q96EX3 536 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 RPF2Q9H7B2 306 aaKnown RBP23.81■■□□□ 1.4
PVT1-219ENST00000523427 CAMK2AQ9UQM7 478 aa23.81■■□□□ 1.4
PVT1-219ENST00000523427 CHCHD2Q9Y6H1 151 aaPredicted RBP23.81■■□□□ 1.4
PVT1-219ENST00000523427 AHRRA9YTQ3 701 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 ACSL3O95573 720 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 EPPINO95925 133 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 IL2RAP01589 272 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 EPORP19235 508 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 SERPINB3P29508 390 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 PLIN5Q00G26 463 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 TOMM20Q15388 145 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 DEFB113Q30KQ7 82 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 C18orf63Q68DL7 685 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 CHSY3Q70JA7 882 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 KLHL7Q8IXQ5 586 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 SLC15A4Q8N697 577 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 DIO2Q92813 273 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 MBD6Q96DN6 1003 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 FBXL20Q96IG2 436 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 ART5Q96L15 291 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 TIMP4Q99727 224 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 TRIM31Q9BZY9 425 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 CNOT11Q9UKZ1 510 aaKnown RBP23.8■■□□□ 1.4
PVT1-219ENST00000523427 SLC6A5Q9Y345 797 aa23.8■■□□□ 1.4
PVT1-219ENST00000523427 WASHC1A8K0Z3 465 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 ATE1O95260 518 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 S100BP04271 92 aaPredicted RBP23.79■■□□□ 1.4
PVT1-219ENST00000523427 FREM3P0C091 2139 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 FBXO45P0C2W1 286 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 ALOX15P16050 662 aaPredicted RBP23.79■■□□□ 1.4
PVT1-219ENST00000523427 CEACAM8P31997 349 aaPredicted RBP23.79■■□□□ 1.4
PVT1-219ENST00000523427 ZNF136P52737 540 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 IGLV3-21P80748 117 aaPredicted RBP23.79■■□□□ 1.4
PVT1-219ENST00000523427 TBL3Q12788 808 aaKnown RBP23.79■■□□□ 1.4
PVT1-219ENST00000523427 DAZAP2Q15038 168 aaPredicted RBP23.79■■□□□ 1.4
PVT1-219ENST00000523427 POU4F3Q15319 338 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 TMEM35AQ53FP2 167 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 TMEM198Q66K66 360 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 RNF111Q6ZNA4 994 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 MAATS1Q7Z4T9 603 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 BBOF1Q8ND07 529 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 POPDC3Q9HBV1 291 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.79■■□□□ 1.4
PVT1-219ENST00000523427 QPCTLQ9NXS2 382 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 MOCS1Q9NZB8 636 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 PCDHGB3Q9Y5G1 929 aa23.79■■□□□ 1.4
PVT1-219ENST00000523427 A0A1B0GTL3 188 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 EEF1E1-BLOC1S5C9J1V9 151 aa23.78■■□□□ 1.4
PVT1-219ENST00000523427 EEF1E1O43324 174 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms