RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SP5Q6BEB4 398 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-220ENST00000522900 LETMD1Q6P1Q0 360 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 MRGPRGQ86SM5 289 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 C9orf40Q8IXQ3 194 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 GPALPP1Q8IXQ4 340 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
SPIDR-220ENST00000522900 POGLUT1Q8NBL1 392 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 OR52N2Q8NGI0 321 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 OR5L2Q8NGL0 311 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 MRPL1Q9BYD6 325 aaKnown RBP17.31■□□□□ 0.36
SPIDR-220ENST00000522900 EPB41L4BQ9H329 900 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 TEX10Q9NXF1 929 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-220ENST00000522900 COPS7AQ9UBW8 275 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 ZNF225Q9UK10 706 aa17.31■□□□□ 0.36
SPIDR-220ENST00000522900 A0A1B0GTH9 108 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 TFECO14948 347 aaPredicted RBP17.3■□□□□ 0.36
SPIDR-220ENST00000522900 DLX3O60479 287 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 PDE9AO76083 593 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 KLK1P06870 262 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 NR2F6P10588 404 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 GRNP28799 593 aaKnown RBP17.3■□□□□ 0.36
SPIDR-220ENST00000522900 PLIN5Q00G26 463 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 IFT88Q13099 833 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 ZNF267Q14586 743 aaPredicted RBP17.3■□□□□ 0.36
SPIDR-220ENST00000522900 CMPK2Q5EBM0 449 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 C3P1Q6ZMU1 363 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 NUDT13Q86X67 352 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 DOLPP1Q86YN1 238 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 ST13P4Q8IZP2 240 aaPredicted RBP17.3■□□□□ 0.36
SPIDR-220ENST00000522900 OR2M7Q8NG81 312 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 TRPC4APQ8TEL6 797 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 FBXL20Q96IG2 436 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 PHF12Q96QT6 1004 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 MEMO1Q9Y316 297 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 NBPF19A0A087WUL8 3843 aa17.3■□□□□ 0.36
SPIDR-220ENST00000522900 TEX15Q9BXT5 2789 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 FOXO6A8MYZ6 492 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 PRSS44E7EML9 344 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 GOLGA8RI6L899 631 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 CDC40O60508 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
SPIDR-220ENST00000522900 SEMA3DO95025 777 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 PDYNP01213 254 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 ESRRAP11474 423 aaPredicted RBP17.29■□□□□ 0.36
SPIDR-220ENST00000522900 ABOP16442 354 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 HSD17B3P37058 310 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 HERVK_113P63132 956 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 ERVK-8P63133 956 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 BIKQ13323 160 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 CDSNQ15517 529 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 GGTA1PQ4G0N0 100 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 UNC50Q53HI1 259 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 C7orf57Q8NEG2 295 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 AGAP11Q8TF27 550 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 MTBPQ96DY7 904 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 CNPPD1Q9BV87 410 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 C1QTNF3Q9BXJ4 246 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 ERVK-6Q9BXR3 956 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 DEFB127Q9H1M4 99 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 ERVK-19Q9WJR5 959 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 HRH3Q9Y5N1 445 aa17.29■□□□□ 0.36
SPIDR-220ENST00000522900 DIDO1Q9BTC0 2240 aaKnown RBP17.29■□□□□ 0.36
SPIDR-220ENST00000522900 ADAM10O14672 748 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 OR10H2O60403 315 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 OR4F21O95013 312 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 NADKO95544 446 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-220ENST00000522900 OTCP00480 354 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 CLPSP04118 112 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 CNR1P21554 472 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 ART3Q13508 389 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 MPEG1Q2M385 716 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 ZNF791Q3KP31 576 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-220ENST00000522900 TCHHL1Q5QJ38 904 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-220ENST00000522900 MTFR2Q6P444 385 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 MYO7BQ6PIF6 2116 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 OPN5Q6U736 354 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 LYPD8Q6UX82 237 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 RTL4Q6ZR62 310 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 MMP21Q8N119 569 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 METTL4Q8N3J2 472 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 ZNF808Q8N4W9 903 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-220ENST00000522900 NUBPLQ8TB37 319 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 RIT1Q92963 219 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 HBEGFQ99075 208 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 ELOVL6Q9H5J4 265 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 WDR41Q9HAD4 459 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 SLC12A4Q9UP95 1085 aa17.28■□□□□ 0.36
SPIDR-220ENST00000522900 IQANK1A0A1B0GTG1 560 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 FAM166BA8MTA8 275 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 DYRK3O43781 588 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 SUPT7LO94864 414 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 SLC35E2P0CK97 266 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 CCL3P10147 92 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 SLC37A1P57057 533 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 PPIAP62937 165 aaKnown RBP17.27■□□□□ 0.36
SPIDR-220ENST00000522900 CLCQ05315 142 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 GALNT1Q10472 559 aaPredicted RBP17.27■□□□□ 0.36
SPIDR-220ENST00000522900 SPRED3Q2MJR0 410 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 ZNF678Q5SXM1 525 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 CCNYL2Q5T2Q4 361 aa17.27■□□□□ 0.36
SPIDR-220ENST00000522900 NDUFAF5Q5TEU4 345 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms