RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NAXEQ8NCW5 288 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 OR2A1Q8NGT9 310 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 CFAP61Q8NHU2 1237 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 C16orf52Q8NHV5 167 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 M1APQ8TC57 530 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-211ENST00000522802 HEXDCQ8WVB3 486 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 TSLPQ969D9 159 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 ZUFSPQ96AP4 578 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 SPATA13Q96N96 652 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 DPH7Q9BTV6 452 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 CNPPD1Q9BV87 410 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 TRIM45Q9H8W5 580 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-211ENST00000522802 LIMA1Q9UHB6 759 aaKnown RBP5.86□□□□□ -1.47
VPS13B-211ENST00000522802 RSPH14Q9UHP6 348 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 MYO6Q9UM54 1294 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 CDC14AQ9UNH5 594 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 KLF13Q9Y2Y9 288 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-211ENST00000522802 EML6Q6ZMW3 1958 aa5.86□□□□□ -1.47
VPS13B-211ENST00000522802 PHF1O43189 567 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 OR1I1O60431 355 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 CDC123O75794 336 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 AP2A2O94973 939 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 SCAF4O95104 1147 aaKnown RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 HRGP04196 525 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 CD1AP06126 327 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 GCSHP23434 173 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 ADRA1AP35348 466 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 ARHGAP25P42331 645 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 XCR1P46094 333 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 CYB561P49447 251 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 HLCSP50747 726 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 WNT3P56703 355 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 MLF1P58340 268 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 SLC26A5P58743 744 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 TAS2R50P59544 299 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 ABRAXAS2Q15018 415 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 TYSND1Q2T9J0 566 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 FBXO42Q6P3S6 717 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 PACS1Q6VY07 963 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 RPS19BP1Q86WX3 136 aaKnown RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 FAM90A1Q86YD7 464 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 FITM2Q8N6M3 262 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 TFB1MQ8WVM0 346 aaKnown RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 KIAA1191Q96A73 305 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 HAUS1Q96CS2 278 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 PERPQ96FX8 193 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 SMC6Q96SB8 1091 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 SARGQ9BW04 601 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 ACAT2Q9BWD1 397 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 GBA3Q9H227 469 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 HSD3B7Q9H2F3 369 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 TMPRSS5Q9H3S3 457 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 C10orf88Q9H8K7 445 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 AIPL1Q9NZN9 384 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 JKAMPQ9P055 326 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 C19orf25Q9UFG5 118 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 R3HDM2Q9Y2K5 976 aaKnown RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 CR1P17927 2039 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 TGP01266 2768 aa5.85□□□□□ -1.47
VPS13B-211ENST00000522802 RAI1Q7Z5J4 1906 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-211ENST00000522802 PRSS29PA6NIE9 313 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 IQCF5A8MTL0 148 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 ZNF487B1APH4 448 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 KDM4EB2RXH2 506 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-211ENST00000522802 G3V3Y1 287 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 SYT5O00445 386 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 BCKDKO14874 412 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 ARHGEF9O43307 516 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 SMPD2O60906 423 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 FAM20BO75063 409 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 CYC1P08574 325 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 IL1RNP18510 177 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 BMP5P22003 454 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 NR4A1P22736 598 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PSMB4P28070 264 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 AGTR2P50052 363 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 ASCL1P50553 236 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PPIAP62937 165 aaKnown RBP5.84□□□□□ -1.47
VPS13B-211ENST00000522802 DGCR2P98153 550 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 RHAGQ02094 409 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 HSPA14Q0VDF9 509 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PTK6Q13882 451 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PDCD4Q53EL6 469 aaKnown RBP5.84□□□□□ -1.47
VPS13B-211ENST00000522802 C1orf185Q5T7R7 199 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 RANBP10Q6VN20 620 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PID1Q7Z2X4 250 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PAQR7Q86WK9 346 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PDSS2Q86YH6 399 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 PLD3Q8IV08 490 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 KRT222Q8N1A0 295 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 CYP4Z2PQ8N1L4 340 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 OR51Q1Q8NH59 317 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 LINC01560Q8TB33 94 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 ELP5Q8TE02 316 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 TMEM158Q8WZ71 300 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 RNASE6Q93091 150 aaKnown RBP5.84□□□□□ -1.47
VPS13B-211ENST00000522802 CCDC138Q96M89 665 aa5.84□□□□□ -1.47
VPS13B-211ENST00000522802 QKIQ96PU8 341 aaKnown RBP eCLIP5.84□□□□□ -1.471e-7■■■□□ 17.4
VPS13B-211ENST00000522802 OR2A5Q96R48 311 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms