RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PCM1Q15154 2024 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 LRIT2A6NDA9 550 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 LCKP06239 509 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 HIST1H1TP22492 207 aaPredicted RBP10.77□□□□□ -0.69
CLK4-206ENST00000520878 C21orf33P30042 268 aaPredicted RBP10.77□□□□□ -0.69
CLK4-206ENST00000520878 MC3RP41968 323 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 RANBP1P43487 201 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 UBXN2BQ14CS0 331 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 PRSS53Q2L4Q9 553 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 MFSD4BQ5TF39 518 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 IKBIPQ70UQ0 350 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 SLCO6A1Q86UG4 719 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 TP53I13Q8NBR0 393 aaPredicted RBP10.77□□□□□ -0.69
CLK4-206ENST00000520878 OR9A2Q8NGT5 310 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 PLEKHA8Q96JA3 519 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 MRGPRX1Q96LB2 322 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 TIMM29Q9BSF4 260 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 GLIPR2Q9H4G4 154 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 TRIM45Q9H8W5 580 aaPredicted RBP10.77□□□□□ -0.69
CLK4-206ENST00000520878 ICKQ9UPZ9 632 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 LYVE1Q9Y5Y7 322 aa10.77□□□□□ -0.69
CLK4-206ENST00000520878 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 C1orf226A1L170 272 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 EML2O95834 649 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 H1F0P07305 194 aaKnown RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 TFPTP0C1Z6 253 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 HNRNPA2B1P22626 353 aaKnown RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 TNFRSF4P43489 277 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 XKP51811 444 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 REEP5Q00765 189 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 GPR68Q15743 365 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 MAPK11Q15759 364 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 FXNQ16595 210 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 B3GNT8Q7Z7M8 397 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 DEPDC4Q8N2C3 294 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 HSPBAP1Q96EW2 488 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 PLXNA4Q9HCM2 1894 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 TMEM184CQ9NVA4 438 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 GPATCH2Q9NW75 528 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 MKLN1Q9UL63 735 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 ENPP4Q9Y6X5 453 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CCDC88CQ9P219 2028 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CHD9Q3L8U1 2897 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 URB1O60287 2271 aaKnown RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 CLEC3AO75596 197 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CDC123O75794 336 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 SEMA3DO95025 777 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 SEMA4FO95754 770 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 ZNF888P0CJ79 500 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 ARAFP10398 606 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 FUT4P22083 530 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CDH3P22223 829 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 TRIM23P36406 574 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 KIR2DL1P43626 348 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 TPMTP51580 245 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 SLC16A1P53985 500 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 EMX1Q04741 257 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 CLEC12AQ5QGZ9 265 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 PERM1Q5SV97 790 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 PIWIL3Q7Z3Z3 882 aaKnown RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 P2RY8Q86VZ1 359 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 RAB2BQ8WUD1 216 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 ZNF639Q9UID6 485 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 STSP08842 583 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CCNYL3P0C7X3 344 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CD36P16671 472 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 NDUFV2P19404 249 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 MAOBP27338 520 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 KCNC4Q03721 635 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 USP51Q70EK9 711 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 ASPGQ86U10 573 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 LRRC56Q8IYG6 542 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 MYDGFQ969H8 173 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 ZHX1-C8orf76Q96EF9 292 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 MAPKAP1Q9BPZ7 522 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 TREX2Q9BQ50 279 aaPredicted RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 IL21RQ9HBE5 538 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CLN6Q9NWW5 311 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 CHCHD3Q9NX63 227 aaKnown RBP10.76□□□□□ -0.69
CLK4-206ENST00000520878 GPR83Q9NYM4 423 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 DNAJC27Q9NZQ0 273 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 POFUT2Q9Y2G5 429 aa10.76□□□□□ -0.69
CLK4-206ENST00000520878 TNFRSF21O75509 655 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 APOL3O95236 402 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 RGS8P57771 180 aaPredicted RBP10.75□□□□□ -0.69
CLK4-206ENST00000520878 SRP54P61011 504 aaKnown RBP10.75□□□□□ -0.69
CLK4-206ENST00000520878 LTB4RQ15722 352 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 ZNF311Q5JNZ3 666 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 EOGTQ5NDL2 527 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 SNAP47Q5SQN1 464 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 TSPYL5Q86VY4 417 aaPredicted RBP10.75□□□□□ -0.69
CLK4-206ENST00000520878 SLC34A3Q8N130 599 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 NUP43Q8NFH3 380 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 OR2L8Q8NGY9 312 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 SMAD5Q99717 465 aaKnown RBP10.75□□□□□ -0.69
CLK4-206ENST00000520878 SPATA9Q9BWV2 254 aa10.75□□□□□ -0.69
CLK4-206ENST00000520878 RBM38Q9H0Z9 239 aaKnown RBP10.75□□□□□ -0.69
CLK4-206ENST00000520878 ZNF576Q9H609 170 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms