RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 DMRT3Q9NQL9 472 aa17.03■□□□□ 0.32
TFF3-204ENST00000518498 FEZF1A0PJY2 475 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 A8MUI8 341 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 C8orf89P0DMQ9 161 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 LBPP18428 481 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 PRPH2P23942 346 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 BCL6P41182 706 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 AVPR1BP47901 424 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 NEK2P51955 445 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 CASP6P55212 293 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 MAD2L1Q13257 205 aaPredicted RBP17.02■□□□□ 0.32
TFF3-204ENST00000518498 FAM53BQ14153 422 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 SLC9B1Q4ZJI4 515 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 NXNQ6DKJ4 435 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 XKRXQ6PP77 449 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 GDF7Q7Z4P5 450 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 ZC3H7AQ8IWR0 971 aaKnown RBP17.02■□□□□ 0.32
TFF3-204ENST00000518498 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.02■□□□□ 0.32
TFF3-204ENST00000518498 ARHGEF39Q8N4T4 335 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 AMER2Q8N7J2 671 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 MTFMTQ96DP5 389 aaKnown RBP17.02■□□□□ 0.32
TFF3-204ENST00000518498 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.32
TFF3-204ENST00000518498 FARSBQ9NSD9 589 aaKnown RBP17.02■□□□□ 0.32
TFF3-204ENST00000518498 AHSPQ9NZD4 102 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 VPS29Q9UBQ0 182 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 SH3BGRL2Q9UJC5 107 aa17.02■□□□□ 0.32
TFF3-204ENST00000518498 URADA6NGE7 173 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 MAGEB17A8MXT2 336 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 JUNP05412 331 aaKnown RBP17.01■□□□□ 0.31
TFF3-204ENST00000518498 SLC35G6P0C7Q6 338 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 COX6B1P14854 86 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 EPHA3P29320 983 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 MAT1AQ00266 395 aaKnown RBP17.01■□□□□ 0.31
TFF3-204ENST00000518498 RGS1Q08116 209 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 PWP1Q13610 501 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 CUL3Q13618 768 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 TERF2Q15554 542 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 OGFOD2Q6N063 350 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 SCIMPQ6UWF3 145 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 CHSY3Q70JA7 882 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 LARP4Q71RC2 724 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■■■■□ 25.6
TFF3-204ENST00000518498 ANKRD53Q8N9V6 530 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 CAMKVQ8NCB2 501 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 SRFBP1Q8NEF9 429 aaKnown RBP17.01■□□□□ 0.31
TFF3-204ENST00000518498 PPP1R36Q96LQ0 422 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 ZNF354BQ96LW1 612 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 EBF4Q9BQW3 602 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 ACPTQ9BZG2 426 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 C1orf109Q9NX04 203 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 SLC12A4Q9UP95 1085 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 TMED5Q9Y3A6 229 aa17.01■□□□□ 0.31
TFF3-204ENST00000518498 ABCA12Q86UK0 2595 aa17■□□□□ 0.31
TFF3-204ENST00000518498 GOLGA8QA0A0J9YX86 632 aa17■□□□□ 0.31
TFF3-204ENST00000518498 GOLGA8OA6NCC3 632 aa17■□□□□ 0.31
TFF3-204ENST00000518498 GOLGA8NF8WBI6 632 aa17■□□□□ 0.31
TFF3-204ENST00000518498 LCMT2O60294 686 aaKnown RBP17■□□□□ 0.31
TFF3-204ENST00000518498 CCDC22O60826 627 aa17■□□□□ 0.31
TFF3-204ENST00000518498 DCTN3O75935 186 aa17■□□□□ 0.31
TFF3-204ENST00000518498 SEMA3DO95025 777 aa17■□□□□ 0.31
TFF3-204ENST00000518498 SERPINA6P08185 405 aa17■□□□□ 0.31
TFF3-204ENST00000518498 SNRPB2P08579 225 aaKnown RBP17■□□□□ 0.31
TFF3-204ENST00000518498 ESRRAP11474 423 aaPredicted RBP17■□□□□ 0.31
TFF3-204ENST00000518498 MAPK1P28482 360 aa17■□□□□ 0.31
TFF3-204ENST00000518498 EFNA3P52797 238 aa17■□□□□ 0.31
TFF3-204ENST00000518498 ARFIP1P53367 373 aa17■□□□□ 0.31
TFF3-204ENST00000518498 STXBP1P61764 594 aaKnown RBP17■□□□□ 0.31
TFF3-204ENST00000518498 RPS13P62277 151 aaKnown RBP17■□□□□ 0.31
TFF3-204ENST00000518498 TGM3Q08188 693 aa17■□□□□ 0.31
TFF3-204ENST00000518498 LSM12Q3MHD2 195 aaKnown RBP17■□□□□ 0.31
TFF3-204ENST00000518498 TMEM35AQ53FP2 167 aa17■□□□□ 0.31
TFF3-204ENST00000518498 SPIN4Q56A73 249 aa17■□□□□ 0.31
TFF3-204ENST00000518498 ZNF766Q5HY98 468 aa17■□□□□ 0.31
TFF3-204ENST00000518498 SPDYAQ5MJ70 313 aa17■□□□□ 0.31
TFF3-204ENST00000518498 MFSD4BQ5TF39 518 aa17■□□□□ 0.31
TFF3-204ENST00000518498 Q6ZSR9 355 aa17■□□□□ 0.31
TFF3-204ENST00000518498 SPATA19Q7Z5L4 167 aa17■□□□□ 0.31
TFF3-204ENST00000518498 CPEB2Q7Z5Q1 589 aaKnown RBP17■□□□□ 0.31
TFF3-204ENST00000518498 ASPGQ86U10 573 aa17■□□□□ 0.31
TFF3-204ENST00000518498 PLD3Q8IV08 490 aa17■□□□□ 0.31
TFF3-204ENST00000518498 C3orf30Q96M34 536 aa17■□□□□ 0.31
TFF3-204ENST00000518498 MS4A8Q9BY19 250 aa17■□□□□ 0.31
TFF3-204ENST00000518498 WDR55Q9H6Y2 383 aaPredicted RBP17■□□□□ 0.31
TFF3-204ENST00000518498 AKTIPQ9H8T0 292 aa17■□□□□ 0.31
TFF3-204ENST00000518498 LRTM1Q9HBL6 345 aa17■□□□□ 0.31
TFF3-204ENST00000518498 C19orf25Q9UFG5 118 aaPredicted RBP17■□□□□ 0.31
TFF3-204ENST00000518498 CCL27Q9Y4X3 112 aa17■□□□□ 0.31
TFF3-204ENST00000518498 PTGDR2Q9Y5Y4 395 aa17■□□□□ 0.31
TFF3-204ENST00000518498 CNTRLQ7Z7A1 2325 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 IGHV3-20A0A0C4DH32 117 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 ATP6AP2A0A1C7CYW4 349 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 H0YIG0 161 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 LSM1O15116 133 aaKnown RBP16.99■□□□□ 0.31
TFF3-204ENST00000518498 P2RX6O15547 441 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 SLC19A2O60779 497 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 ATP6AP2O75787 350 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 MYO1DO94832 1006 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 SEC24DO94855 1032 aaPredicted RBP16.99■□□□□ 0.31
TFF3-204ENST00000518498 ERVK-8P63133 956 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 HMGCS1Q01581 520 aa16.99■□□□□ 0.31
TFF3-204ENST00000518498 SF3A3Q12874 501 aaKnown RBP eCLIP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms