RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 EPN3Q9H201 632 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 REEP4Q9H6H4 257 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 KCNK13Q9HB14 408 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 NECTIN3Q9NQS3 549 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 GIMAP4Q9NUV9 329 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 AIG1Q9NVV5 245 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 EHD3Q9NZN3 535 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 HEY2Q9UBP5 337 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 G3BP2Q9UN86 482 aaKnown RBP12.19□□□□□ -0.46
PABPC1-205ENST00000518196 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 RAXQ9Y2V3 346 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 HRH3Q9Y5N1 445 aa12.19□□□□□ -0.46
PABPC1-205ENST00000518196 URB1O60287 2271 aaKnown RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 OR2W5A6NFC9 320 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 ST8SIA5O15466 376 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 PRKRAO75569 313 aaKnown RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 ERAL1O75616 437 aaKnown RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 LRATO95237 230 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 GPR75O95800 540 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 ALDOCP09972 364 aaKnown RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 PRPS1L1P21108 318 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 MAOAP21397 527 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 OTX2P32243 289 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 DIO3P55073 304 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 FOXL2P58012 376 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 STX1BP61266 288 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 IRX1P78414 480 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 FOLH1Q04609 750 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 UGT8Q16880 541 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 FAM69BQ5VUD6 431 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 TMEM198Q66K66 360 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 TMEM205Q6UW68 189 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 RIPOR1Q6ZS17 1223 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 PROSER1Q86XN7 944 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 SAMD14Q8IZD0 417 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 MMP21Q8N119 569 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 ANKRD9Q96BM1 317 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 CATSPER2Q96P56 530 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 PELOQ9BRX2 385 aaKnown RBP12.18□□□□□ -0.46
PABPC1-205ENST00000518196 ALOXE3Q9BYJ1 711 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 UTS2RQ9UKP6 389 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 CES1P1Q9UKY3 287 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 ZNF780BQ9Y6R6 833 aa12.18□□□□□ -0.46
PABPC1-205ENST00000518196 WDFY3Q8IZQ1 3526 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 IGKV3D-11A0A0A0MRZ8 115 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 CDC14CA4D256 554 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 PEX12O00623 359 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 FGF17O60258 216 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 TBX19O60806 448 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 IFNA16P05015 189 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 FURINP09958 794 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 NCF2P19878 526 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 XKP51811 444 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 CLNS1AP54105 237 aaKnown RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 UCNP55089 124 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 OR4D2P58180 307 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 ID2Q02363 134 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 PTGR1Q14914 329 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 PDCD4Q53EL6 469 aaKnown RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 METTL21CQ5VZV1 264 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 CCDC81Q6ZN84 652 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 CPEB2Q7Z5Q1 589 aaKnown RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 ANKRD37Q7Z713 158 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 TICAM1Q8IUC6 712 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 OR4N5Q8IXE1 308 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 NATD1Q8N6N6 113 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 TSLPQ969D9 159 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 UCN3Q969E3 161 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 EXOSC8Q96B26 276 aaKnown RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 KLHL29Q96CT2 875 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 RBM18Q96H35 190 aaKnown RBP12.17□□□□□ -0.46
PABPC1-205ENST00000518196 MARK4Q96L34 752 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 DGAT2Q96PD7 388 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 BBS4Q96RK4 519 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 BRINP2Q9C0B6 783 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 ATAD3AQ9NVI7 634 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 TAS2R7Q9NYW3 318 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 C5AR2Q9P296 337 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 ATP6V1HQ9UI12 483 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 ENTPD4Q9Y227 616 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 GPR45Q9Y5Y3 372 aa12.17□□□□□ -0.46
PABPC1-205ENST00000518196 MYOCOSA0A1B0GUC4 107 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 TCRBV16S1A1N1A0A5B0 115 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 WASHC1A8K0Z3 465 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 GABRR3A8MPY1 467 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 SCAMP2O15127 329 aaKnown RBP12.16□□□□□ -0.46
PABPC1-205ENST00000518196 EFSO43281 561 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 OR10H2O60403 315 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 COX7A2P14406 83 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 PORP16435 677 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-205ENST00000518196 TNNI3P19429 210 aa12.16□□□□□ -0.46
PABPC1-205ENST00000518196 CSNK2A2P19784 350 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms