RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SH3GLB1Q9Y371 365 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 C8orf89P0DMQ9 161 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 CSNK2A2P19784 350 aaPredicted RBP25.08■■□□□ 1.61
COL13A1-210ENST00000517713 ISL1P61371 349 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 C1orf61Q13536 156 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 MAPK11Q15759 364 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 MEP1AQ16819 746 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 CHDHQ8NE62 594 aaPredicted RBP25.08■■□□□ 1.61
COL13A1-210ENST00000517713 MAGED4Q96JG8 741 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 ROGDIQ9GZN7 287 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 ADNPQ9H2P0 1102 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 GIMAP4Q9NUV9 329 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 DDX18Q9NVP1 670 aaKnown RBP25.08■■□□□ 1.61
COL13A1-210ENST00000517713 HRASLS2Q9NWW9 162 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 CEPT1Q9Y6K0 416 aa25.08■■□□□ 1.61
COL13A1-210ENST00000517713 ARHGEF17Q96PE2 2063 aaPredicted RBP25.08■■□□□ 1.61
COL13A1-210ENST00000517713 H3BSA7 217 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 P2RX6O15547 441 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 OR12D1P0DN82 309 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 MATN1P21941 496 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 RYKP34925 604 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 FEN1P39748 380 aaKnown RBP25.07■■□□□ 1.6
COL13A1-210ENST00000517713 BLKP51451 505 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 SPIBQ01892 262 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 DUSP2Q05923 314 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 CD47Q08722 323 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 DUSP7Q16829 419 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 C6orf141Q5SZD1 244 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 PARGQ86W56 976 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 FAM174AQ8TBP5 190 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 SFXN5Q8TD22 340 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 KLK4Q9Y5K2 254 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 TMEM247A6NEH6 219 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 B4GAT1O43505 415 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 PDE9AO76083 593 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 SMIM10L1P0DMW3 83 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 ALPPL2P10696 532 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 ETS2P15036 469 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 IL7RP16871 459 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 PEX19P40855 299 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 SIM2Q14190 667 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-210ENST00000517713 UBXN2BQ14CS0 331 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 SUZ12Q15022 739 aaKnown RBP25.07■■□□□ 1.6
COL13A1-210ENST00000517713 CTU2Q2VPK5 515 aaKnown RBP25.07■■□□□ 1.6
COL13A1-210ENST00000517713 GIPC3Q8TF64 312 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 NMD3Q96D46 503 aaKnown RBP25.07■■□□□ 1.6
COL13A1-210ENST00000517713 SMIM10Q96HG1 83 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 P2RX2Q9UBL9 471 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 TRPC4Q9UBN4 977 aa25.07■■□□□ 1.6
COL13A1-210ENST00000517713 URADA6NGE7 173 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 DNAJB5O75953 348 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 NR2F6P10588 404 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 CYP4B1P13584 511 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 CRHBPP24387 322 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 EEF1B2P24534 225 aaKnown RBP25.06■■□□□ 1.6
COL13A1-210ENST00000517713 MPIP34949 423 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 PTGER1P34995 402 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 RPS6KA3P51812 740 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 PRKAG1P54619 331 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 ESRRGP62508 458 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 SNRPNP63162 240 aaKnown RBP25.06■■□□□ 1.6
COL13A1-210ENST00000517713 FZD5Q13467 585 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 GPR19Q15760 415 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 BHLHB9Q6PI77 547 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 TTC29Q8NA56 475 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-210ENST00000517713 CAMKVQ8NCB2 501 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 ZCCHC10Q8TBK6 192 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 ZFYVE21Q9BQ24 234 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 NPLQ9BXD5 320 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-210ENST00000517713 EXD2Q9NVH0 621 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 PSME2Q9UL46 239 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 COMMD3-BMI1R4GMX3 469 aa25.06■■□□□ 1.6
COL13A1-210ENST00000517713 SLC28A2O43868 658 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 MFN2O95140 757 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 CD247P20963 164 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 XCR1P46094 333 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 LSSP48449 732 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 CLK3P49761 638 aaKnown RBP25.05■■□□□ 1.6
COL13A1-210ENST00000517713 CDH12P55289 794 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 RELAQ04206 551 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 RAPSNQ13702 412 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 KEAP1Q14145 624 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 FRMPD2BQ6IN97 320 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 OR5D16Q8NGK9 328 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 OR4C15Q8NGM1 316 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 XAGE5Q8WWM1 108 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 HLA-CQ95604 372 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 MOAP1Q96BY2 351 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 SERINC2Q96SA4 455 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 PIP5K1AQ99755 562 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 EVA1BQ9NVM1 165 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 MRPS17Q9Y2R5 130 aaKnown RBP25.05■■□□□ 1.6
COL13A1-210ENST00000517713 FAM32AQ9Y421 112 aaKnown RBP25.05■■□□□ 1.6
COL13A1-210ENST00000517713 ZNF451Q9Y4E5 1061 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 ZNF780BQ9Y6R6 833 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 ENPP4Q9Y6X5 453 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 LOC105369274A0A096LPK9 316 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 LOC102723532A0A0G2JNH3 316 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 A0A1W2PS29 197 aa25.05■■□□□ 1.6
COL13A1-210ENST00000517713 PVRP15151 417 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms