RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CNRIP1Q96F85 164 aaPredicted RBP19.68■□□□□ 0.74
LSM6-207ENST00000515311 SLC45A3Q96JT2 553 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 ZNF681Q96N22 645 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 ENTPD4Q9Y227 616 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 IL6P05231 212 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 LAMP1P11279 417 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 CPMP14384 443 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 MMP11P24347 488 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 IL12AP29459 219 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 KIR3DL1P43629 444 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 ZFP36L2P47974 494 aaKnown RBP19.67■□□□□ 0.74
LSM6-207ENST00000515311 XKP51811 444 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 POLR2JP52435 117 aaKnown RBP19.67■□□□□ 0.74
LSM6-207ENST00000515311 SSPNQ14714 243 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 PRSS53Q2L4Q9 553 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 FAM174BQ3ZCQ3 159 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 ZNF385BQ569K4 471 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 CPZQ66K79 652 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 BLOC1S3Q6QNY0 202 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 OR4N5Q8IXE1 308 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 TSLPQ969D9 159 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 PELOQ9BRX2 385 aaKnown RBP19.67■□□□□ 0.74
LSM6-207ENST00000515311 DUSP26Q9BV47 211 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 ALOXE3Q9BYJ1 711 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 MYLK2Q9H1R3 596 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 C19orf25Q9UFG5 118 aaPredicted RBP19.67■□□□□ 0.74
LSM6-207ENST00000515311 IL17BQ9UHF5 180 aa19.67■□□□□ 0.74
LSM6-207ENST00000515311 MYO1GB0I1T2 1018 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 PDPK1O15530 556 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 CREG1O75629 220 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 SLC35E2P0CK97 266 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 PORP16435 677 aaPredicted RBP19.66■□□□□ 0.74
LSM6-207ENST00000515311 NTSP30990 170 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 S100A3P33764 101 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 GALNSP34059 522 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 FRKP42685 505 aaPredicted RBP19.66■□□□□ 0.74
LSM6-207ENST00000515311 STT3AP46977 705 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 PLIN5Q00G26 463 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 ID2Q02363 134 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 UBAP2LQ14157 1087 aaKnown RBP19.66■□□□□ 0.74
LSM6-207ENST00000515311 MPEG1Q2M385 716 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 PGS1Q32NB8 556 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 AGKQ53H12 422 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 SPANXN4Q5MJ08 99 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 FAM69BQ5VUD6 431 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 ANKRD37Q7Z713 158 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 VASH2Q86V25 355 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 FUNDC1Q8IVP5 155 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 ST13P4Q8IZP2 240 aaPredicted RBP19.66■□□□□ 0.74
LSM6-207ENST00000515311 LRRC25Q8N386 305 aaPredicted RBP19.66■□□□□ 0.74
LSM6-207ENST00000515311 NUDT8Q8WV74 236 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 BBS4Q96RK4 519 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 ACSS1Q9NUB1 689 aaPredicted RBP19.66■□□□□ 0.74
LSM6-207ENST00000515311 CCDC167Q9P0B6 97 aa19.66■□□□□ 0.74
LSM6-207ENST00000515311 LOC102723996A0A087X1L8 192 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 A0A1W2PQ72 361 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 DYTNA2CJ06 578 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 ATP1B1P05026 303 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 PGRP06401 933 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 MPIP34949 423 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 FEN1P39748 380 aaKnown RBP19.65■□□□□ 0.74
LSM6-207ENST00000515311 CBX1P83916 185 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 KLF10Q13118 480 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 MSANTD1Q6ZTZ1 278 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 TSPEARQ8WU66 669 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 ZBED6CLQ96FA7 236 aaPredicted RBP19.65■□□□□ 0.74
LSM6-207ENST00000515311 LRRC37BQ96QE4 947 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 ADAP2Q9NPF8 381 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 FAM120CQ9NX05 1096 aaKnown RBP19.65■□□□□ 0.74
LSM6-207ENST00000515311 SSUH2Q9Y2M2 353 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 HS3ST3B1Q9Y662 390 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 MRPS18BQ9Y676 258 aaKnown RBP19.65■□□□□ 0.74
LSM6-207ENST00000515311 CAPN7Q9Y6W3 813 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 APC2O95996 2303 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 ASPMQ8IZT6 3477 aa19.65■□□□□ 0.74
LSM6-207ENST00000515311 FRYQ5TBA9 3013 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 A0A1W2PS29 197 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 C9JVG2 144 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 OR10H2O60403 315 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 EIF2S3P41091 472 aaKnown RBP19.64■□□□□ 0.73
LSM6-207ENST00000515311 KCNK10P57789 538 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 LRRC74AQ0VAA2 488 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 IL10RAQ13651 578 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 MLC1Q15049 377 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 TERF2Q15554 542 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 ELAVL1Q15717 326 aaKnown RBP19.64■□□□□ 0.73
LSM6-207ENST00000515311 ZNF750Q32MQ0 723 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 ANXA8L1Q5VT79 327 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 FAAH2Q6GMR7 532 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 FAM180BQ6P0A1 224 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 UNQ6494/PRO21346Q6UXR6 183 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 LANCL3Q6ZV70 420 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 PPP1R32Q7Z5V6 425 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 RAB43Q86YS6 212 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 VPS37AQ8NEZ2 397 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 ZFP28Q8NHY6 868 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 SUN3Q8TAQ9 357 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 CIDECQ96AQ7 238 aaPredicted RBP19.64■□□□□ 0.73
LSM6-207ENST00000515311 RBM18Q96H35 190 aaKnown RBP19.64■□□□□ 0.73
LSM6-207ENST00000515311 NAF1Q96HR8 494 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms