RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PLA2G2FQ9BZM2 168 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 BCL2L10Q9HD36 194 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 AKIP1Q9NQ31 210 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 FBXL12Q9NXK8 326 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 SEC14L3Q9UDX4 400 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 FTSJ1Q9UET6 329 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 SNX7Q9UNH6 387 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 COLEC10Q9Y6Z7 277 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 DSPPQ9NZW4 1301 aa14.08□□□□□ -0.16
NUP54-217ENST00000514987 ATG2AQ2TAZ0 1938 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 A0A1W2PQU0 124 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 MAN2B1O00754 1011 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 PRICKLE3O43900 615 aaPredicted RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 RNGTTO60942 597 aaKnown RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 SULT1C4O75897 302 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 SLITRK5O94991 958 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 GASTP01350 101 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 DNTTP04053 509 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 SERPIND1P05546 499 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 NR2F1P10589 423 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 PIPP12273 146 aaPredicted RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 NDUFS1P28331 727 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 CLK1P49759 484 aaKnown RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 MLLT10P55197 1068 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 VBP1P61758 197 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■□□□□ 10.7
NUP54-217ENST00000514987 ILKQ13418 452 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 GANABQ14697 944 aaKnown RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 CYP27C1Q4G0S4 372 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 C2orf27AQ580R0 203 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 KLHL17Q6TDP4 642 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 PTCHD4Q6ZW05 846 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 ZNF367Q7RTV3 350 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 MINDY2Q8NBR6 621 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 OR2L5Q8NG80 312 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 OR52E1Q8NGJ3 308 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 NDNFQ8TB73 568 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 RAB8BQ92930 207 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 C17orf62Q9BQA9 187 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 APOOQ9BUR5 198 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 TRMT61BQ9BVS5 477 aaKnown RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 CDCA4Q9BXL8 241 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 ABCG4Q9H172 646 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 KIR3DX1Q9H7L2 352 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 SERGEFQ9UGK8 458 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 SCML1Q9UN30 329 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 KCNK6Q9Y257 313 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 GPC6Q9Y625 555 aaPredicted RBP14.07□□□□□ -0.16
NUP54-217ENST00000514987 A3GALT2U3KPV4 340 aa14.07□□□□□ -0.16
NUP54-217ENST00000514987 IGKV1-8A0A0C4DH67 115 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 PDZK1P1A8MUH7 402 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 ANHXE9PGG2 379 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 AIREO43918 545 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 FUCA1P04066 466 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 OCM2P0CE71 109 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 OCMP0CE72 109 aaPredicted RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 EN2P19622 333 aaPredicted RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 CHMP24386 653 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 SLC19A1P41440 591 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 RANBP1P43487 201 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 KIR2DL1P43626 348 aaPredicted RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 GSSP48637 474 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 CRISP3P54108 245 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 UGT2B15P54855 530 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 LIM2P55344 173 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 SNRPGP62308 76 aaKnown RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 RPS26P62854 115 aaKnown RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 IRF3Q14653 427 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 RPE65Q16518 533 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 NDUFA9Q16795 377 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 RPS26P11Q5JNZ5 115 aaPredicted RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 MRM1Q6IN84 353 aaKnown RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 TCTN3Q6NUS6 607 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 DCDC5Q6ZRR9 648 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 USP43Q70EL4 1123 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 ZNF554Q86TJ5 538 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 IGFN1Q86VF2 1251 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 KBTBD8Q8NFY9 601 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 OR56A1Q8NGH5 318 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 OR6Q1Q8NGQ2 317 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 ZNF675Q8TD23 568 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 MS4A6EQ96DS6 147 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 ERLEC1Q96DZ1 483 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 TREX2Q9BQ50 279 aaPredicted RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 BTBD2Q9BX70 525 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 RACGAP1Q9H0H5 632 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 OR51I1Q9H343 314 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 GLIPR2Q9H4G4 154 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 XKR8Q9H6D3 395 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 ZCCHC3Q9NUD5 404 aaKnown RBP14.06□□□□□ -0.16
NUP54-217ENST00000514987 GIMAP4Q9NUV9 329 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 NDOR1Q9UHB4 597 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 OSGIN1Q9UJX0 560 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 SLC9A8Q9Y2E8 581 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 GPSM3Q9Y4H4 160 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 PLXND1Q9Y4D7 1925 aa14.06□□□□□ -0.16
NUP54-217ENST00000514987 A0A0G2JPF8 293 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms