RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PSMA8Q8TAA3 256 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 FGF11Q92914 225 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 CNRIP1Q96F85 164 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 DUSP26Q9BV47 211 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 YIPF2Q9BWQ6 316 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 DPH1Q9BZG8 443 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 FAM120CQ9NX05 1096 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 CROTQ9UKG9 612 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 UTS2RQ9UKP6 389 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 MKL2Q9ULH7 1088 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 LOC101059948A0A1B0GTJ6 334 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 TGFBR3LH3BV60 316 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 HAX1O00165 279 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 TAF4O00268 1085 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 B4GALT2O60909 372 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 JRKO75564 520 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 PRKRAO75569 313 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 LRATO95237 230 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 PGRP06401 933 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 UMODP07911 640 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 LAMP1P11279 417 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 CPMP14384 443 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 PORP16435 677 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 MMP11P24347 488 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 PRDX6P30041 224 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 MPIP34949 423 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 DLSTP36957 453 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 FOLR3P41439 243 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 STT3AP46977 705 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ALDH9A1P49189 494 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 XKP51811 444 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 EFNA3P52797 238 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 EMP2P54851 167 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 WNT3P56703 355 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 BTG2P78543 158 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 CBX1P83916 185 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 FOLH1Q04609 750 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC13A2Q13183 592 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ERV3-1Q14264 604 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 SSPNQ14714 243 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 MAPRE2Q15555 327 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 PRSS53Q2L4Q9 553 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 MPEG1Q2M385 716 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 FAM174BQ3ZCQ3 159 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 AGKQ53H12 422 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 SPANXN4Q5MJ08 99 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ANXA8L1Q5VT79 327 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ST13P4Q8IZP2 240 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 VPS37AQ8NEZ2 397 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 OR7A2PQ8NGA2 310 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 OR9I1Q8NGQ6 314 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 CDC26Q8NHZ8 85 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 UCN3Q969E3 161 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 GFM2Q969S9 779 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 KIAA1143Q96AT1 154 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 KLHL29Q96CT2 875 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ERP27Q96DN0 273 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ZBED6CLQ96FA7 236 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 CRB3Q9BUF7 120 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC25A23Q9BV35 468 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 NECTIN3Q9NQS3 549 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 GIMAP4Q9NUV9 329 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 CCDC167Q9P0B6 97 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 BTNL2Q9UIR0 455 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 C3orf18Q9UK00 162 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 G3BP2Q9UN86 482 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 ZNF780BQ9Y6R6 833 aa11.23□□□□□ -0.61
PDLIM5-220ENST00000514830 DSPP15924 2871 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 PRSS51A0A1B0GVH4 220 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 A0A1W2PP18 115 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 GLOD5A6NK44 160 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 BBIP1A8MTZ0 92 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 CFLARO15519 480 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 PDPK1O15530 556 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 LDB3O75112 727 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ALOX12BO75342 701 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 HEXBP07686 556 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 C8orf89P0DMQ9 161 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 MAOAP21397 527 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 NTSP30990 170 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 S100A3P33764 101 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 NUP214P35658 2090 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 KCNK10P57789 538 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 PHC1P78364 1004 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 PLIN5Q00G26 463 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 STX4Q12846 297 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 CLN3Q13286 438 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 UBAP2LQ14157 1087 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ELAVL1Q15717 326 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 NSDHLQ15738 373 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 SPRED3Q2MJR0 410 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 MINDY4Q4G0A6 757 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 LRRC25Q8N386 305 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 IL22RA1Q8N6P7 574 aa11.22□□□□□ -0.61
PDLIM5-220ENST00000514830 ZNF248Q8NDW4 579 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms