RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 LAMA5O15230 3695 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 TRBV11-1A0A0K0K1C0 115 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 TRPC5OSA6NMA1 111 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 DPM1O60762 260 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 VPS4BO75351 444 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 CEACAM4O75871 244 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 ZFAND5O76080 213 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 SLC35E2P0CK97 266 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 PORP16435 677 aaPredicted RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 DDX5P17844 614 aaKnown RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 PRPH2P23942 346 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 FEN1P39748 380 aaKnown RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 ARG2P78540 354 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 MAD2L1Q13257 205 aaPredicted RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 ZNF267Q14586 743 aaPredicted RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 TERF2Q15554 542 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 CES4AQ5XG92 561 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 SLC48A1Q6P1K1 146 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 MORN4Q8NDC4 146 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 OR2T11Q8NH01 316 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 NCLNQ969V3 563 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 EXOSC8Q96B26 276 aaKnown RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 BBS4Q96RK4 519 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 LMF1Q96S06 567 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 WDR77Q9BQA1 342 aaPredicted RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 CNPPD1Q9BV87 410 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 ZNF552Q9H707 407 aaPredicted RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 MED4Q9NPJ6 270 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 SIRT5Q9NXA8 310 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 C5AR2Q9P296 337 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 CCL27Q9Y4X3 112 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 CACNA1BQ00975 2339 aa13.58□□□□□ -0.24
SNF8-212ENST00000514089 SNRNP200O75643 2136 aaKnown RBP13.58□□□□□ -0.24
SNF8-212ENST00000514089 TGFBR3LH3BV60 316 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 LSM1O15116 133 aaKnown RBP13.57□□□□□ -0.24
SNF8-212ENST00000514089 AKAP10O43572 662 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 MPIP34949 423 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 ASMTP46597 345 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 MEP1AQ16819 746 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 FCRLBQ6BAA4 426 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 NXNQ6DKJ4 435 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 HSDL2Q6YN16 418 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 ATG14Q6ZNE5 492 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 HPS6Q86YV9 775 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 MMP21Q8N119 569 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 SUN3Q8TAQ9 357 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 DOK4Q8TEW6 326 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
SNF8-212ENST00000514089 PTPMT1Q8WUK0 201 aaPredicted RBP13.57□□□□□ -0.24
SNF8-212ENST00000514089 GFM2Q969S9 779 aaKnown RBP13.57□□□□□ -0.24
SNF8-212ENST00000514089 TSSK3Q96PN8 268 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 SORT1Q99523 831 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 SMAD5Q99717 465 aaKnown RBP13.57□□□□□ -0.24
SNF8-212ENST00000514089 MFRPQ9BY79 579 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 BRINP2Q9C0B6 783 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNF8-212ENST00000514089 CDCP1Q9H5V8 836 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNF8-212ENST00000514089 SH3BP4Q9P0V3 963 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 BAIAP2L1Q9UHR4 511 aa13.57□□□□□ -0.24
SNF8-212ENST00000514089 EPG5Q9HCE0 2579 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 K7EM74 188 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 KLF11O14901 512 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 HDAC3O15379 428 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 ZZEF1O43149 2961 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 SNNO75324 88 aaPredicted RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 LRATO95237 230 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 CPMP14384 443 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 DDCP20711 480 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 CASRP41180 1078 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 OC90Q02509 493 aaPredicted RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 MFAP5Q13361 173 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 KIAA0040Q15053 153 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 SOWAHCQ53LP3 525 aaPredicted RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 C6orf136Q5SQH8 315 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 IL23RQ5VWK5 629 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 B3GNTL1Q67FW5 361 aaPredicted RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 IKBIPQ70UQ0 350 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 RPS19BP1Q86WX3 136 aaKnown RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 TICAM1Q8IUC6 712 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 CCDC116Q8IYX3 515 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 LIX1Q8N485 282 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 KIF2BQ8N4N8 673 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 OR5L2Q8NGL0 311 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 OR1N1Q8NGS0 311 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 SLC2A12Q8TD20 617 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 SENP5Q96HI0 755 aaPredicted RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 C3orf30Q96M34 536 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 PRPF18Q99633 342 aaKnown RBP13.56□□□□□ -0.24
SNF8-212ENST00000514089 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 AKTIPQ9H8T0 292 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 MYNNQ9NPC7 610 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 SLC35C2Q9NQQ7 365 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 HEY2Q9UBP5 337 aa13.56□□□□□ -0.24
SNF8-212ENST00000514089 HEATR5BQ9P2D3 2071 aa13.55□□□□□ -0.24
SNF8-212ENST00000514089 CFAP47Q6ZTR5 3102 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms