RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CAPN14A8MX76 684 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CTAG2O75638 210 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 ATP6AP2O75787 350 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 S100BP04271 92 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CD99P14209 185 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CPN2P22792 545 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 STX2P32856 288 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 PIK3CBP42338 1070 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 MAGEA5P43359 124 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CHIT1Q13231 466 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 UBAP2Q5T6F2 1119 aaKnown RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 C1orf185Q5T7R7 199 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 RTL6Q6ICC9 239 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 OR4C11Q6IEV9 310 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 MED27Q6P2C8 311 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CCDC91Q7Z6B0 441 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 UBE3DQ7Z6J8 389 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 TMEM200AQ86VY9 491 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 LRRC25Q8N386 305 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 ZCCHC7Q8N3Z6 543 aaKnown RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 SNX31Q8N9S9 440 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 ANKRD9Q96BM1 317 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 DGAT2Q96PD7 388 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CSF3RQ99062 836 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 MS4A8Q9BY19 250 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 ALG9Q9H6U8 611 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 RPF2Q9H7B2 306 aaKnown RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 DNAJB12Q9NXW2 375 aaKnown RBP11.6□□□□□ -0.55
VEGFA-216ENST00000512683 Q9UFV3 132 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 RNF112Q9ULX5 631 aa11.6□□□□□ -0.55
VEGFA-216ENST00000512683 CACNA1CQ13936 2221 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 IQANK1A0A1B0GTG1 560 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 GOSR1O95249 250 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 ETHE1O95571 254 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 MTHFD2P13995 350 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 PTX3P26022 381 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 MSH2P43246 934 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 KIR2DL3P43628 341 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 PLIN5Q00G26 463 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 ASPHQ12797 758 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 NAB1Q13506 487 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 FBXL19-AS1Q494R0 122 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 KHDRBS2Q5VWX1 349 aaKnown RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 CAMKMTQ7Z624 323 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 GPR180Q86V85 440 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 ST13P4Q8IZP2 240 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 CENPLQ8N0S6 344 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 FAM222BQ8WU58 562 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 TP53INP1Q96A56 240 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 RGMAQ96B86 450 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 SPACA9Q96E40 222 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 FBXL20Q96IG2 436 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 SECISBP2Q96T21 854 aaKnown RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 MAPKAP1Q9BPZ7 522 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 EXO5Q9H790 373 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 NMRAL1Q9HBL8 299 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 TUBA8Q9NY65 449 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 ZNF629Q9UEG4 869 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-216ENST00000512683 PHF11Q9UIL8 331 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 PCDHGA11Q9Y5H2 935 aa11.59□□□□□ -0.55
VEGFA-216ENST00000512683 K7EPI3 171 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 UBXN8O00124 270 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 DVL2O14641 736 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 KERAO60938 352 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 LDB3O75112 727 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 CDH16O75309 829 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 SNX4O95219 450 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 GPR75O95800 540 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 EPPINO95925 133 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 LTA4HP09960 611 aaKnown RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 CCL3P10147 92 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 FOSL1P15407 271 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 ALOX15P16050 662 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 CRABP2P29373 138 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 TIMP3P35625 211 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 BUD31P41223 144 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 DNASE1L1P49184 302 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 IST1P53990 364 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 DLX5P56178 289 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 IRF9Q00978 393 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 CKAP4Q07065 602 aaKnown RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 SLAMF1Q13291 335 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 DAZAP2Q15038 168 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 SPRED3Q2MJR0 410 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 C8orf74Q6P047 294 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 METTL2BQ6P1Q9 378 aaKnown RBP11.58□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF793Q6ZN11 406 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 RAPH1Q70E73 1250 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 SLC29A4Q7RTT9 530 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 PM20D2Q8IYS1 436 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 TAGAPQ8N103 731 aa11.58□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF321PQ8N8H1 164 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms