RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FABP1P07148 127 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 NPY5RQ15761 445 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 CST6Q15828 149 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 C14orf28Q4W4Y0 310 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 LRFN4Q6PJG9 635 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 FMR1NBQ8N0W7 255 aaPredicted RBP8.57□□□□□ -1.04
VCAN-208ENST00000512590 LSMEM2Q8N112 164 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 MYLIPQ8WY64 445 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 ZNF347Q96SE7 839 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 MBOAT4Q96T53 435 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 C7orf50Q9BRJ6 194 aaKnown RBP8.57□□□□□ -1.04
VCAN-208ENST00000512590 TPPP3Q9BW30 176 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 MROQ9BYG7 248 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 SLC2A8Q9NY64 477 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 B3GALT1Q9Y5Z6 326 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 A0A0A6YYH2 397 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 A6NJ64 397 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 ADAM23O75077 832 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 HNRNPA2B1P22626 353 aaKnown RBP8.57□□□□□ -1.04
VCAN-208ENST00000512590 LUMP51884 338 aaPredicted RBP8.57□□□□□ -1.04
VCAN-208ENST00000512590 TBRG1Q3YBR2 411 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 SPIN4Q56A73 249 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 TPRG1LQ5T0D9 272 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 FIGLAQ6QHK4 219 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 ERI1Q8IV48 349 aaKnown RBP8.57□□□□□ -1.04
VCAN-208ENST00000512590 CMTM1Q8IZ96 169 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 ESX1Q8N693 406 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 OR8K3Q8NH51 312 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 AENQ8WTP8 325 aaKnown RBP8.57□□□□□ -1.04
VCAN-208ENST00000512590 PCED1BQ96HM7 432 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 CIB1Q99828 191 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 STEAP1Q9UHE8 339 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 PRR36Q9H6K5 1346 aa8.57□□□□□ -1.04
VCAN-208ENST00000512590 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ALOX15BO15296 676 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 BCHEP06276 602 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 CCNCP24863 283 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 IL2RGP31785 369 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 EMP3P54852 163 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NDUFA6P56556 154 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 RPS15AP62244 130 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 ZNF829Q3KNS6 432 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 GPR33Q49SQ1 333 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ZNF765Q7L2R6 523 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NET1Q7Z628 596 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 CUZD1Q86UP6 607 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 KLBQ86Z14 1044 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 LRRC34Q8IZ02 419 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 OR5AK3PQ8NH89 298 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SLC6A7Q99884 636 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 TRAF6Q9Y4K3 522 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NPFFR2Q9Y5X5 522 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 DVL1O14640 695 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SULT1B1O43704 296 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 TIMP1P01033 207 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ASGR2P07307 311 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 IFI30P13284 250 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ZNF44P15621 663 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 KITLGP21583 273 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 XKP51811 444 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 DVL1P1P54792 670 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 CXADRP78310 365 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PLCXD3Q63HM9 321 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 CMTM4Q8IZR5 234 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 DMBX1Q8NFW5 382 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 OR5P2Q8WZ92 322 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 LPGAT1Q92604 370 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PSMG2Q969U7 264 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 GSTO2Q9H4Y5 243 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ZNF160Q9HCG1 818 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 C19orf12Q9NSK7 152 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 MYOTQ9UBF9 498 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PCDHGA5Q9Y5G8 931 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 CRXO43186 299 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 EPCAMP16422 314 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NDUFB7P17568 137 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 CD79BP40259 229 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 EIF2B1Q14232 305 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 GAS6Q14393 721 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SHISA6Q6ZSJ9 500 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SLC22A16Q86VW1 577 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 RALGPS2Q86X27 583 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 MDGA1Q8NFP4 955 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 FANK1Q8TC84 345 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ERMAPQ96PL5 475 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 SHARPINQ9H0F6 387 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NUDT15Q9NV35 164 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SCP2D1Q9UJQ7 156 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 TIMM22Q9Y584 194 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PBRM1Q86U86 1689 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 C4orf47A7E2U8 309 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NUDT21O43809 227 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 ECI2O75521 394 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SLC11A1P49279 550 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 RNF144AP50876 292 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 CCNHP51946 323 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 AGFG1P52594 562 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 RPS13P62277 151 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms