RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SAYSD1Q9NPB0 183 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 POT1Q9NUX5 634 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 PCYOX1Q9UHG3 505 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 PILRAQ9UKJ1 303 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF148Q9UQR1 794 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 PKP3Q9Y446 797 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 ARL5AQ9Y689 179 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 SAR1BQ9Y6B6 198 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 MGAQ8IWI9 3026 aa3.36□□□□□ -1.87
UBE2D3-226ENST00000508635 ANKRD12Q6UB98 2062 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF106Q9H2Y7 1883 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 APC2O95996 2303 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 MAGEB16A2A368 324 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CTAGE9A4FU28 777 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 OR5K3A6NET4 321 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 MGAT4DA6NG13 374 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NPIPB13A6NJU9 1138 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 C2orf81A6NN90 581 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 A6NNC1 897 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NPIPB5A8MRT5 1133 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF814B7Z6K7 855 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NPIPB4C9JG80 1138 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 H7C0S8 307 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 IFRD1O00458 451 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CCL22O00626 93 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PRPF4O43172 522 aaKnown RBP eCLIP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 HNRNPRO43390 633 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 KIF1CO43896 1103 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 SRP72O76094 671 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 STK17BO94768 372 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NDUFB8O95169 186 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CSF1P09603 554 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FGF5P12034 268 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PKMP14618 531 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 AMD1P17707 334 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 GSTM2P28161 218 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FDFT1P37268 417 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 COILP38432 576 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NPY2RP49146 381 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FNTAP49354 379 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF140P52738 457 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PPP1CAP62136 330 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 XIAPP98170 497 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PDE1BQ01064 536 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ACVR1Q04771 509 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FOXM1Q08050 763 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PMPCAQ10713 525 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ALKBH1Q13686 389 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NFE2L1Q14494 772 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 IL11RAQ14626 422 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF260Q3ZCT1 412 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF658BQ4V348 819 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 BCL7AQ4VC05 210 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 C6orf10Q5SRN2 563 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FNBP1LQ5T0N5 605 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CAPRIN2Q6IMN6 1127 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 IRGCQ6NXR0 463 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 LRRC8BQ6P9F7 803 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 COLCA1Q6ZS62 124 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FAM92BQ6ZTR7 304 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 DET1Q7L5Y6 550 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PRSS42Q7Z5A4 293 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 SNX20Q7Z614 316 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PRUNE1Q86TP1 453 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 LINC00523Q86TU6 105 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CCDC25Q86WR0 208 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ENDOVQ8N8Q3 282 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 MCUQ8NE86 351 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 OR13C4Q8NGS5 318 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 OR2L2Q8NH16 312 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NAT14Q8WUY8 206 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PEX13Q92968 403 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 TRIM63Q969Q1 353 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ULK4Q96C45 1275 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CXorf40BQ96DE9 158 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 CDKN2AIPNLQ96HQ2 116 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ELMO2Q96JJ3 720 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 SLC41A2Q96JW4 573 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ZNF514Q96K75 400 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 LINC00615Q96LM1 132 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 TGM7Q96PF1 710 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 RANBP9Q96S59 729 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 NAPGQ99747 312 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 TBL1YQ9BQ87 522 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 TMEM79Q9BSE2 394 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 AP1M1Q9BXS5 423 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 WWP1Q9H0M0 922 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FAM96AQ9H5X1 160 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 ASB8Q9H765 288 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 LRRC40Q9H9A6 602 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 GPN2Q9H9Y4 310 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 G6PC2Q9NQR9 355 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 EIF2B3Q9NR50 452 aaKnown RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 STARD5Q9NSY2 213 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PAK5Q9P286 719 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 EPHA6Q9UF33 1036 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 IL17BQ9UHF5 180 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 PSMD13Q9UNM6 376 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 DTX4Q9Y2E6 619 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms