RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ENPP6Q6UWR7 440 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LANCL3Q6ZV70 420 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HSD11B1LQ7Z5J1 315 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SCD5Q86SK9 330 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DCUN1D3Q8IWE4 304 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 UBQLNLQ8IYU4 475 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LSMEM1Q8N8F7 131 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PDPRQ8NCN5 879 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 FBXO36Q8NEA4 188 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ACVR1CQ8NER5 493 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ELOA3Q8NG57 546 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DAZLQ92904 295 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 FAM129BQ96TA1 746 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SEPHS2Q99611 448 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 EPYCQ99645 322 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LPAR4Q99677 370 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 UQCC2Q9BRT2 126 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PLGRKTQ9HBL7 147 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SEMA4BQ9NPR2 832 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 EMC3Q9P0I2 261 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ATG2BQ96BY7 2078 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ANKUB1A6NFN9 424 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 A6NHS1 94 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SGK494L7N484 410 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CCL21O00585 134 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RFXANKO14593 260 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HAT1O14929 419 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CYB5BO43169 146 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 AP2A2O94973 939 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HOXB9P17482 250 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GNAZP19086 355 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 IDH2P48735 452 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 B2MP61769 119 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC10A7Q0GE19 358 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SCRN3Q0VDG4 424 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SCGB2A2Q13296 93 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MSLNQ13421 630 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 EXT1Q16394 746 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZMAT1Q5H9K5 638 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 WASHC2DQ5SRD0 308 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GPRC6AQ5T6X5 926 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ELP2Q6IA86 826 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 C1orf94Q6P1W5 598 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 VHLLQ6RSH7 139 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OLFML1Q6UWY5 402 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 FRRS1Q6ZNA5 592 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CXXC5Q7LFL8 322 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TSPAN33Q86UF1 283 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RANBP3LQ86VV4 465 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZC3HC1Q86WB0 502 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PIK3C3Q8NEB9 887 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RGMAQ96B86 450 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 Q96MT0 163 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OR1F2PQ96R84 312 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CCT8L2Q96SF2 557 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZSWIM1Q9BR11 485 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TRMOQ9BU70 441 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 STRA6Q9BX79 667 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PKIBQ9C010 78 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OR8D2Q9GZM6 311 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ALG9Q9H6U8 611 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ANKZF1Q9H8Y5 726 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MBNL1Q9NR56 388 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CENPMQ9NSP4 180 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LRFN1Q9P244 771 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC22A14Q9Y267 594 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGA3Q9Y5H0 932 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DOCK6Q96HP0 2047 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1B0GTQ1 180 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGA12O60330 932 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 B3GALNT1O75752 331 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TNFAIP8O95379 198 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PAHP00439 452 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RENP00797 406 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CHRNGP07510 517 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DBTP11182 482 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CHRNA4P43681 627 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SPINT3P49223 89 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RIDAP52758 137 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 BLMHQ13867 455 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TERF2Q15554 542 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DPYSL2Q16555 572 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZSWIM7Q19AV6 140 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SPANXN2Q5MJ10 180 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CPTPQ5TA50 214 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 AGBL4Q5VU57 503 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 C11orf63Q6NUN7 778 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PGBD2Q6P3X8 592 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 LILRA6Q6PI73 481 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TTC33Q6PID6 262 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ADAMTSL4Q6UY14 1074 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MED25Q71SY5 747 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC26A11Q86WA9 606 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CEP97Q8IW35 865 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 KATNAL2Q8IYT4 538 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 CISD2Q8N5K1 135 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OR2L3Q8NG85 312 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OR2L8Q8NGY9 312 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OR4C6Q8NH72 309 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms