RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 CSF3RQ99062 836 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 DOHHQ9BU89 302 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 PELI2Q9HAT8 420 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 ARL15Q9NXU5 204 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 SONP18583 2426 aaKnown RBP12.7□□□□□ -0.38
DDR1-260ENST00000507533 PABPN1LA6NDY0 278 aaKnown RBP12.7□□□□□ -0.38
DDR1-260ENST00000507533 SDR42E2A6NKP2 422 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 CYR61O00622 381 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 ERI3O43414 337 aaKnown RBP12.7□□□□□ -0.38
DDR1-260ENST00000507533 ETHE1O95571 254 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 MAGEA3P43357 314 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 MRPS25P82663 173 aaKnown RBP12.7□□□□□ -0.38
DDR1-260ENST00000507533 TNK1Q13470 666 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 MORF4L2Q15014 288 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 UGT3A1Q6NUS8 523 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 NXPE4Q6UWF7 544 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 HIPK1Q86Z02 1210 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 SLC15A4Q8N697 577 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 BBOF1Q8ND07 529 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 MNS1Q8NEH6 495 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 OR10G3Q8NGC4 313 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 NUBPLQ8TB37 319 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 ZNF721Q8TF20 911 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 ZNF597Q96LX8 424 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 ERP44Q9BS26 406 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 UGT2B28Q9BY64 529 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 TRIM31Q9BZY9 425 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
DDR1-260ENST00000507533 SNX24Q9Y343 169 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 DYRK1BQ9Y463 629 aa12.7□□□□□ -0.38
DDR1-260ENST00000507533 CHCHD2Q9Y6H1 151 aaPredicted RBP12.7□□□□□ -0.38
DDR1-260ENST00000507533 A0A088AWK7 358 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 MAGEB16A2A368 324 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 HAX1O00165 279 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 PHF1O43189 567 aaPredicted RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 TRIM3O75382 744 aaPredicted RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 HAUS5O94927 633 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 SEC31AO94979 1220 aaKnown RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 HPNP05981 417 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 ZNF10P21506 573 aaPredicted RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 MC3RP41968 323 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 SLC1A2P43004 574 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 CDK9P50750 372 aaKnown RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 NR1H2P55055 460 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 LIM2P55344 173 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 SERTAD2Q14140 314 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 RCAN2Q14206 197 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 CAPRIN1Q14444 709 aaKnown RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 EFTUD2Q15029 972 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■■□□ 18.6
DDR1-260ENST00000507533 NHSL2Q5HYW2 709 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 DCST1Q5T197 706 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 C10orf62Q5T681 223 aaPredicted RBP12.69□□□□□ -0.38
DDR1-260ENST00000507533 TMPRSS11BQ86T26 416 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 C9orf40Q8IXQ3 194 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 KLHDC8AQ8IYD2 350 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 ZNF441Q8N8Z8 693 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 ATL1Q8WXF7 558 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 MS4A6EQ96DS6 147 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 SIGLEC10Q96LC7 697 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 WFIKKN1Q96NZ8 548 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 QRFPRQ96P65 431 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 KLHL28Q9NXS3 571 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 ADGRE2Q9UHX3 823 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 MAD1L1Q9Y6D9 718 aa12.69□□□□□ -0.38
DDR1-260ENST00000507533 LRIT2A6NDA9 550 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 A8MXE2 369 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 SNPHO15079 494 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 LDB3O75112 727 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 RCBTB2O95199 551 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 TP53P04637 393 aaPredicted RBP12.68□□□□□ -0.38
DDR1-260ENST00000507533 FBXO45P0C2W1 286 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 CTAGE8P0CG41 777 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 CYP4B1P13584 511 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 SERPINB3P29508 390 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 CPOXP36551 454 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
DDR1-260ENST00000507533 PLA2G16P53816 162 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 DIO3P55073 304 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 AP1S2P56377 157 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 TIAL1Q01085 375 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDR1-260ENST00000507533 RCN2Q14257 317 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 PAQR3Q6TCH7 311 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 PLEKHM3Q6ZWE6 761 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 CTAGE4Q8IX94 777 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 DND1Q8IYX4 353 aaKnown RBP12.68□□□□□ -0.38
DDR1-260ENST00000507533 MMGT1Q8N4V1 131 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 ZPLD1Q8TCW7 415 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 SLC44A1Q8WWI5 657 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 CCT6BQ92526 530 aa12.68□□□□□ -0.38
DDR1-260ENST00000507533 ABTB1Q969K4 478 aaPredicted RBP12.68□□□□□ -0.38
DDR1-260ENST00000507533 ZNF669Q96BR6 464 aaPredicted RBP12.68□□□□□ -0.38
DDR1-260ENST00000507533 INTS12Q96CB8 462 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms