RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ETHE1O95571 254 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 IGHG3P01860 377 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 ALDOAP04075 364 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 CAPN3P20807 821 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 ELAVL4P26378 380 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 SERPINB3P29508 390 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 CHRNB4P30926 498 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 ARL1P40616 181 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 CCNG1P51959 295 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 IRF9Q00978 393 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC7A5Q01650 507 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 FOLH1Q04609 750 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 TRADDQ15628 312 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 TECRLQ5HYJ1 363 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 TBCELQ5QJ74 424 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 MRM1Q6IN84 353 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 GOLGA7Q7Z5G4 137 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 FGD2Q7Z6J4 655 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 SRRM1Q8IYB3 904 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 TAGAPQ8N103 731 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 MYRIPQ8NFW9 859 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 WDR20Q8TBZ3 569 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 SARAFQ96BY9 339 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 GPR78Q96P69 363 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 FMO2Q99518 471 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 TTTY12Q9BZ98 90 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 NMRK1Q9NWW6 199 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 QPCTLQ9NXS2 382 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 NINJ2Q9NZG7 142 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 BOKQ9UMX3 212 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 A0A0A6YYD5 115 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 KIF2AO00139 706 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 SUSD5O60279 629 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 HCN1O60741 890 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 FAM58BPP0C7Q3 252 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 PRF1P14222 555 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 BSGP35613 385 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 MAGEA12P43365 314 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 TMED10P49755 219 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 RPP38P78345 283 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 IFT88Q13099 833 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC10A1Q14973 349 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 GGTA1PQ4G0N0 100 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 FRG2Q64ET8 278 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 LCA5Q86VQ0 697 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 PTGR2Q8N8N7 351 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 OR52N2Q8NGI0 321 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 PAQR8Q8TEZ7 354 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 CHTF18Q8WVB6 975 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 RIT1Q92963 219 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 TP53INP1Q96A56 240 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 MRRFQ96E11 262 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 SPACA9Q96E40 222 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 FRG2BQ96QU4 278 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 MRPL57Q9BQC6 102 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 ENKD1Q9H0I2 346 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 NOL11Q9H8H0 719 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 DEPPQ9NTK1 212 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 B4GALT7Q9UBV7 327 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 ASB4Q9Y574 426 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 PCDHGB3Q9Y5G1 929 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 CENPEQ02224 2701 aa13.34□□□□□ -0.27
HMGCS1-203ENST00000507004 AQP7O14520 342 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 TP53I11O14683 189 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 WDR1O75083 606 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 CDH16O75309 829 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 SH3BGRLO75368 114 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 OTCP00480 354 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 CTAGE8P0CG41 777 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 PIK3R1P27986 724 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 RFC3P40938 356 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 ID2Q02363 134 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 ASPHQ12797 758 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF791Q3KP31 576 aaPredicted RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 HLA-DQA1Q5Y7H0 255 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 TTC19Q6DKK2 380 aaPredicted RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 CTAGE4Q8IX94 777 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 OR4N5Q8IXE1 308 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 LILRB4Q8NHJ6 448 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 TRPC4APQ8TEL6 797 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 SMC6Q96SB8 1091 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 SECISBP2Q96T21 854 aaKnown RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 CNPPD1Q9BV87 410 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 DEFB127Q9H1M4 99 aa13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 MRPL46Q9H2W6 279 aaKnown RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 LIN28AQ9H9Z2 209 aaKnown RBP13.33□□□□□ -0.28
HMGCS1-203ENST00000507004 CFL2Q9Y281 166 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms