RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ADAP2Q9NPF8 381 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 TCF7L2Q9NQB0 619 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 AIG1Q9NVV5 245 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 ATP6V1HQ9UI12 483 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 FBXL4Q9UKA2 621 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 UTS2RQ9UKP6 389 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 PSME2Q9UL46 239 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 PPIEQ9UNP9 301 aaKnown RBP12.02□□□□□ -0.49
TCOF1-210ENST00000506767 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
TCOF1-210ENST00000506767 MYOCOSA0A1B0GUC4 107 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 GABRR3A8MPY1 467 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 LSP1P33241 339 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 GPR143P51810 404 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 XKP51811 444 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 SOX8P57073 446 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 ACTN3Q08043 901 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 TERF2Q15554 542 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 ELAVL1Q15717 326 aaKnown RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 DEFB109BQ30KR1 87 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 DCAF10Q5QP82 559 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 NXNQ6DKJ4 435 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 PAPD4Q6PIY7 484 aaKnown RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 DGAT2L6Q6ZPD8 337 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 ACAD11Q709F0 780 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 TICAM1Q8IUC6 712 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 APLFQ8IW19 511 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 NFAM1Q8NET5 270 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 CDC26Q8NHZ8 85 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 PTPMT1Q8WUK0 201 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 GFM2Q969S9 779 aaKnown RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 THOC1Q96FV9 657 aaKnown RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 CRELD1Q96HD1 420 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 LPAR4Q99677 370 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 PELOQ9BRX2 385 aaKnown RBP12.01□□□□□ -0.49
TCOF1-210ENST00000506767 BRINP2Q9C0B6 783 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 SLC35C2Q9NQQ7 365 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 MAN2B2Q9Y2E5 1009 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 GPR45Q9Y5Y3 372 aa12.01□□□□□ -0.49
TCOF1-210ENST00000506767 LAMA5O15230 3695 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 NSG1A0A0A6YYJ2 146 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 SAGE2PA6NJ88 616 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ARGFXA6NJG6 315 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 MYO1GB0I1T2 1018 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 MASP2O00187 686 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 SCAMP2O15127 329 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 UBDO15205 165 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 POLR3GO15318 223 aaPredicted RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 AKAP10O43572 662 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ERAL1O75616 437 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 SEC24DO94855 1032 aaPredicted RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 LRATO95237 230 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 IFNA16P05015 189 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ATP1B1P05026 303 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
TCOF1-210ENST00000506767 CPMP14384 443 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 PORP16435 677 aaPredicted RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 CSNK2A2P19784 350 aaPredicted RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 PRPS1L1P21108 318 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 RPL3P39023 403 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 FRKP42685 505 aaPredicted RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 MRPL19P49406 292 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 RRADP55042 308 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 SLC26A5P58743 744 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 DUSP2Q05923 314 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 Q0VFX4 171 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 GSTA3Q16772 222 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 MPEG1Q2M385 716 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF750Q32MQ0 723 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF385BQ569K4 471 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 TMEM198Q66K66 360 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 PLAG1Q6DJT9 500 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 FAM180BQ6P0A1 224 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 R3HCC1LQ7Z5L2 792 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 SAMD14Q8IZD0 417 aaPredicted RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 FAM9CQ8IZT9 166 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 AMER2Q8N7J2 671 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 SUN3Q8TAQ9 357 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 EXOSC8Q96B26 276 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 PPWD1Q96BP3 646 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 KLHL29Q96CT2 875 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 COQ8BQ96D53 544 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 RBM18Q96H35 190 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 DGAT2Q96PD7 388 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ING2Q9H160 280 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF160Q9HCG1 818 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 MIEF1Q9NQG6 463 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 PNO1Q9NRX1 252 aaKnown RBP12□□□□□ -0.49
TCOF1-210ENST00000506767 DCTN4Q9UJW0 460 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 MAPRE3Q9UPY8 281 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF780BQ9Y6R6 833 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 PKD1L2Q7Z442 2459 aa12□□□□□ -0.49
TCOF1-210ENST00000506767 ZFYVE26Q68DK2 2539 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 A8MUA0 341 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 DDAH2O95865 285 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 ITGB2P05107 769 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 ICAM2P13598 275 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 IDO1P14902 403 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 SOX18P35713 384 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 FEN1P39748 380 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms