RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FAIM2Q9BWQ8 316 aa6.8□□□□□ -1.32
GYPB-206ENST00000506516 ZNF717Q9BY31 904 aaPredicted RBP6.8□□□□□ -1.32
GYPB-206ENST00000506516 MRPL1Q9BYD6 325 aaKnown RBP6.8□□□□□ -1.32
GYPB-206ENST00000506516 ADAP2Q9NPF8 381 aa6.8□□□□□ -1.32
GYPB-206ENST00000506516 SLAMF7Q9NQ25 335 aa6.8□□□□□ -1.32
GYPB-206ENST00000506516 RRAGDQ9NQL2 400 aaPredicted RBP6.8□□□□□ -1.32
GYPB-206ENST00000506516 PFDN4Q9NQP4 134 aa6.8□□□□□ -1.32
GYPB-206ENST00000506516 PNO1Q9NRX1 252 aaKnown RBP6.8□□□□□ -1.32
GYPB-206ENST00000506516 ABI3Q9P2A4 366 aa6.8□□□□□ -1.32
GYPB-206ENST00000506516 ASB4Q9Y574 426 aa6.8□□□□□ -1.32
GYPB-206ENST00000506516 PTPRQQ9UMZ3 2332 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 GNG14A0A1W2PPG7 69 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 A0A1W2PR48 441 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 C1orf226A1L170 272 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 WDR91A4D1P6 747 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 TMPRSS11DO60235 418 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 LDB3O75112 727 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 C1QL1O75973 258 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 SNUPNO95149 360 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 GPR75O95800 540 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 GBAP04062 536 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 NR2F6P10588 404 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ITGAMP11215 1152 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 PIK3R1P27986 724 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 TPP2P29144 1249 aaPredicted RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 SERPINB3P29508 390 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 GSTM5P46439 218 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 CLCN2P51788 898 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 HNRNPFP52597 415 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 FOXA1P55317 472 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 HNRNPH2P55795 449 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 TRA2BP62995 288 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 HMGCS1Q01581 520 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ACSM2AQ08AH3 577 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 TBL3Q12788 808 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 MFAP5Q13361 173 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ELAVL1Q15717 326 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 MEP1AQ16819 746 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ARL13AQ5H913 290 aaPredicted RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 HHATQ5VTY9 493 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ACSM2BQ68CK6 577 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 H3F3CQ6NXT2 135 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 SCIMPQ6UWF3 145 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 COMMD6Q7Z4G1 85 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 CLNKQ7Z7G1 428 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 C1orf52Q8N6N3 182 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 SIRT6Q8N6T7 355 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 MORN4Q8NDC4 146 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 OR4K14Q8NGD5 310 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 SUN3Q8TAQ9 357 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 DNAJB14Q8TBM8 379 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ELP5Q8TE02 316 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 PSMF1Q92530 271 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 HAS2Q92819 552 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ANKRD9Q96BM1 317 aaPredicted RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 ZBTB9Q96C00 473 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 METTL2AQ96IZ6 378 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 DGAT2Q96PD7 388 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 HBEGFQ99075 208 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 CCT7Q99832 543 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 PAIP2Q9BPZ3 127 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 PELOQ9BRX2 385 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 MECRQ9BV79 373 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 DEFB126Q9BYW3 111 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ACPTQ9BZG2 426 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 SHCBP1LQ9BZQ2 653 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ILKAPQ9H0C8 392 aaPredicted RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 TMBIM4Q9HC24 238 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 NKIRAS1Q9NYS0 192 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 MCM8Q9UJA3 840 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 B3GNT3Q9Y2A9 372 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 WBP11Q9Y2W2 641 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 TRAF6Q9Y4K3 522 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 ATG4BQ9Y4P1 393 aa6.79□□□□□ -1.32
GYPB-206ENST00000506516 MDC1Q14676 2089 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 SMG1Q96Q15 3661 aaKnown RBP6.79□□□□□ -1.32
GYPB-206ENST00000506516 GLOD5A6NK44 160 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 C17orf105B2RV13 164 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 PGRMC2O15173 223 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 SLC28A2O43868 658 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 PCDH7O60245 1069 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 OR10H2O60403 315 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 SEC22BO75396 215 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 RSL1D1O76021 490 aaKnown RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 ZFAND5O76080 213 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 HSPA4LO95757 839 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 CHRNGP07510 517 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 CELA2AP08217 269 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 SLC35E2P0CK97 266 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 DRD2P14416 443 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ALOX15P16050 662 aaPredicted RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 GRK2P25098 689 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 GALNSP34059 522 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 CASRP41180 1078 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 STT3AP46977 705 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 HTR6P50406 440 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 SLC18A1P54219 525 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 MAGOHP61326 146 aaKnown RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 ARG2P78540 354 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms