RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLC48A1Q6P1K1 146 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 PAPD4Q6PIY7 484 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 RIPOR1Q6ZS17 1223 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 IKBIPQ70UQ0 350 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 OR4N5Q8IXE1 308 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 TMEM132CQ8N3T6 1108 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 FNDC5Q8NAU1 212 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 OR4K14Q8NGD5 310 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 TTC9Q92623 222 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 PELOQ9BRX2 385 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 CCDC134Q9H6E4 229 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ZNF160Q9HCG1 818 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 TAS2R7Q9NYW3 318 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 EHD3Q9NZN3 535 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 GIMAP2Q9UG22 337 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 SAGE2PA6NJ88 616 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 EDF1O60869 148 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 CEACAM4O75871 244 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 SEC24DO94855 1032 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 TGDSO95455 350 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 SLC35E2P0CK97 266 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 ALOX15P16050 662 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 LBPP18428 481 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 DDCP20711 480 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 GALNSP34059 522 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 MDH1P40925 334 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 STT3AP46977 705 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 ALDH9A1P49189 494 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 SLC26A5P58743 744 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 AP2B1P63010 937 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 ERVK-8P63133 956 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 CHAF1BQ13112 559 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 IL23RQ5VWK5 629 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 FAM47EQ6ZV65 393 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 MAVSQ7Z434 540 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 ST13P4Q8IZP2 240 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 MMP21Q8N119 569 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 NFAM1Q8NET5 270 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 M1APQ8TC57 530 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 EXTL1Q92935 676 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 RBM18Q96H35 190 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 MAELQ96JY0 434 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 EGLN2Q96KS0 407 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 PPP1R36Q96LQ0 422 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 DGAT2Q96PD7 388 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 TRIM55Q9BYV6 548 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 PNO1Q9NRX1 252 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 NOP53Q9NZM5 478 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 PPIEQ9UNP9 301 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 EXO1Q9UQ84 846 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 EIF3LQ9Y262 564 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
PDLIM5-208ENST00000504489 COL6A6A6NMZ7 2263 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 MYOCOSA0A1B0GUC4 107 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 A8MUA0 341 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 MASP2O00187 686 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 TBX19O60806 448 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 IFNA16P05015 189 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 SERPINA7P05543 415 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 PCSK2P16519 638 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 CSNK2A2P19784 350 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 XKP51811 444 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 PLIN5Q00G26 463 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 GUCY1A3Q02108 690 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 Q0VFX4 171 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 EPGNQ6UW88 154 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 SPATA19Q7Z5L4 167 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 KBTBD2Q8IY47 623 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 SAMD14Q8IZD0 417 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 GALNT16Q8N428 558 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 LIX1Q8N485 282 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 MORN4Q8NDC4 146 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 B3GNT7Q8NFL0 401 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 OR14A16Q8NHC5 309 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 CDC26Q8NHZ8 85 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 ACTRT2Q8TDY3 377 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 PTPMT1Q8WUK0 201 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 DAZLQ92904 295 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 KLHL29Q96CT2 875 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 WBP1Q96G27 269 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 ZNF764Q96H86 408 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 ZNF681Q96N22 645 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 TSSK3Q96PN8 268 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 C1orf50Q9BV19 199 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 LHPPQ9H008 270 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 REEP4Q9H6H4 257 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 WDR55Q9H6Y2 383 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 MMP25Q9NPA2 562 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 MIEF1Q9NQG6 463 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 SLC35C2Q9NQQ7 365 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 C5AR2Q9P296 337 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 BAIAP2L1Q9UHR4 511 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 UTS2RQ9UKP6 389 aa11.12□□□□□ -0.63
PDLIM5-208ENST00000504489 CLCA3PQ9Y6N3 262 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms