RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 BCHEP06276 602 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 JUNDP17535 347 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 CD27P26842 260 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 RRM2P31350 389 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF750Q32MQ0 723 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 CAMKVQ8NCB2 501 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 PIK3C3Q8NEB9 887 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 KLHL6Q8WZ60 621 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 SLC35G5Q96KT7 338 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF681Q96N22 645 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF300Q96RE9 604 aaPredicted RBP20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 ZFYVE21Q9BQ24 234 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 RBM38Q9H0Z9 239 aaKnown RBP20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 RUBCNLQ9H714 662 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 ENTPD4Q9Y227 616 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 SCN3AQ9NY46 2000 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 LOC105369274A0A096LPK9 316 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 LOC102723532A0A0G2JNH3 316 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 A0A0J9YY10 115 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 RECKO95980 971 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 CSNK2A2P19784 350 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 MAGEA8P43361 318 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 OR1E2P47887 323 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 SH3BGRP55822 239 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 CNPY1Q3B7I2 92 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 RPS26P11Q5JNZ5 115 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 CWF19L1Q69YN2 538 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 FRMPD2BQ6IN97 320 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 FAHD1Q6P587 224 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 RBM12BQ8IXT5 1001 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 CCDC116Q8IYX3 515 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 OR4N4Q8N0Y3 316 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 ZDHHC1Q8WTX9 485 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 KLHL25Q9H0H3 589 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 SEMA3GQ9NS98 782 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 ZCCHC3Q9NUD5 404 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 KCMF1Q9P0J7 381 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 WNT16Q9UBV4 365 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 PCDHGA8Q9Y5G5 932 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 LYVE1Q9Y5Y7 322 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 A0A1W2PR77 199 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 A0A1W2PS29 197 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 C5orf58C9J3I9 102 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 ADAMDEC1O15204 470 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 JRKO75564 520 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 PVRP15151 417 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 POLR2IP36954 125 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 HHEXQ03014 270 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 SUZ12Q15022 739 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 RNF44Q7L0R7 432 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 SMYD1Q8NB12 490 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 FAM46DQ8NEK8 389 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 RSC1A1Q92681 617 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 C10orf90Q96M02 699 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 SERINC2Q96SA4 455 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 OR51I1Q9H343 314 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF451Q9Y4E5 1061 aa20.15■□□□□ 0.82
UBE2D3-216ENST00000503742 PRAMEF27A3QJZ7 478 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 OR5K3A6NET4 321 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 URADA6NGE7 173 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 NR2F6P10588 404 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ITGA2P17301 1181 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 CD247P20963 164 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ELK4P28324 431 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 PXNP49023 591 aaPredicted RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 IL18R1Q13478 541 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 DUSP7Q16829 419 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF691Q5VV52 312 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 BORAQ6PGQ7 559 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 APOBEC4Q8WW27 367 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 DGCR14Q96DF8 476 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 PCED1AQ9H1Q7 454 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 H0YGG7 62 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 SH3BP5O60239 455 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 NDUFS2O75306 463 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 DNAJB5O75953 348 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 MFN2O95140 757 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 CSF2P04141 144 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 C8orf89P0DMQ9 161 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 OR12D1P0DN82 309 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 FEN1P39748 380 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 XCR1P46094 333 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ARF3P61204 181 aaPredicted RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ISL1P61371 349 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 TNFRSF17Q02223 184 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 GPR19Q15760 415 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF761Q86XN6 746 aaPredicted RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 DEFB119Q8N690 84 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 OR4C15Q8NGM1 316 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ZCCHC10Q8TBK6 192 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 MOAP1Q96BY2 351 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 SHDQ96IW2 340 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 RSPO3Q9BXY4 272 aaPredicted RBP20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ING2Q9H160 280 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 GIMAP4Q9NUV9 329 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 PHF11Q9UIL8 331 aa20.14■□□□□ 0.81
UBE2D3-216ENST00000503742 ALPPL2P10696 532 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 MATN1P21941 496 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 CD38P28907 300 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 MPIP34949 423 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms