RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 PLIN5Q00G26 463 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 TBR1Q16650 682 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 BTBD16Q32M84 506 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 IL23RQ5VWK5 629 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 GALNT18Q6P9A2 607 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 TMEM205Q6UW68 189 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 ACAD11Q709F0 780 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 SCUBE1Q8IWY4 988 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 LIX1Q8N485 282 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 TMEM102Q8N9M5 508 aaPredicted RBP12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 OR4K14Q8NGD5 310 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 UCN3Q969E3 161 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 METTL2AQ96IZ6 378 aaKnown RBP12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 ZNF700Q9H0M5 742 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 MEAF6Q9HAF1 191 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 MYNNQ9NPC7 610 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 ATP13A2Q9NQ11 1180 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 NOP53Q9NZM5 478 aaKnown RBP12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 BAIAP2L1Q9UHR4 511 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 UTS2RQ9UKP6 389 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 ENTPD4Q9Y227 616 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 CLCA3PQ9Y6N3 262 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 SCN2AQ99250 2005 aa12.55□□□□□ -0.4
PGGT1B-204ENST00000503638 TCRBV16S1A1N1A0A5B0 115 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 C17orf105B2RV13 164 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 GPR75O95800 540 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 BCKDHAP12694 445 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 DRD2P14416 443 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 SDC1P18827 310 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 NT5EP21589 574 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 TACR1P25103 407 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 FEN1P39748 380 aaKnown RBP12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 ASMTP46597 345 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 XKP51811 444 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 AQP5P55064 265 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 ERVK-8P63133 956 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 AIMP2Q13155 320 aaKnown RBP12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 FAM180BQ6P0A1 224 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 SLC48A1Q6P1K1 146 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 IKBIPQ70UQ0 350 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 KBTBD2Q8IY47 623 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 ANKRD9Q96BM1 317 aaPredicted RBP12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 PPWD1Q96BP3 646 aaKnown RBP12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 THOC3Q96J01 351 aaKnown RBP12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 BBS4Q96RK4 519 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 TUBB6Q9BUF5 446 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 NPHS2Q9NP85 383 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 SIRT5Q9NXA8 310 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 HEY2Q9UBP5 337 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 KCNMB2Q9Y691 235 aa12.54□□□□□ -0.4
PGGT1B-204ENST00000503638 COL6A6A6NMZ7 2263 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 LOC102723996A0A087X1L8 192 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 IGKV3D-11A0A0A0MRZ8 115 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 SYNDIG1LA6NDD5 238 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 TGFBR3LH3BV60 316 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 SDHDO14521 159 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 ITGB2P05107 769 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 TROVE2P10155 538 aaKnown RBP eCLIP12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 DDCP20711 480 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 POLE2P56282 527 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 NME5P56597 212 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 EMX2Q04743 252 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 PCOLCEQ15113 449 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 EXT1Q16394 746 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 SLC9B1Q4ZJI4 515 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 ANKRD26P1Q6NSI1 321 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 RGS9BPQ6ZS82 235 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 TICAM1Q8IUC6 712 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 C7orf57Q8NEG2 295 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 DNAJB14Q8TBM8 379 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 DOK4Q8TEW6 326 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 DAZLQ92904 295 aaKnown RBP12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 ZDHHC16Q969W1 377 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 PELOQ9BRX2 385 aaKnown RBP12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 CNPPD1Q9BV87 410 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 OR8D2Q9GZM6 311 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 SH3BP4Q9P0V3 963 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 COPS7AQ9UBW8 275 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 DCTN4Q9UJW0 460 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 PCDHGA10Q9Y5H3 936 aa12.53□□□□□ -0.4
PGGT1B-204ENST00000503638 SAGE2PA6NJ88 616 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 A8MUI8 341 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 NPIPB8E9PQR5 432 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 MKRN2OSH3BPM6 223 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 EDF1O60869 148 aaKnown RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 CELA2AP08217 269 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms