RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 OPRPNQ99935 248 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM213AQ9BRX8 229 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ERP44Q9BS26 406 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 UBAC1Q9BSL1 405 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 DCTN5Q9BTE1 182 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 TBCDQ9BTW9 1192 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 TPPP3Q9BW30 176 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PAPOLGQ9BWT3 736 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 DDX47Q9H0S4 455 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 RAB17Q9H0T7 212 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 NAPBQ9H115 298 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 UPF3AQ9H1J1 476 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 COQ10BQ9H8M1 238 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 MED20Q9H944 212 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZDHHC18Q9NUE0 388 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SOHLH2Q9NX45 425 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 UBQLN2Q9UHD9 624 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 BAIAP2L1Q9UHR4 511 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SMC3Q9UQE7 1217 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 KCNK6Q9Y257 313 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PLEKHA6Q9Y2H5 1048 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ETV7Q9Y603 341 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 KIAA1217Q5T5P2 1943 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PRRC2AP48634 2157 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 A0A087WZY1 265 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM230AA0A1W2PPH8 454 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CTAGE15A4D2H0 777 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 MPTX1A8MV57 137 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 LMO7DNF2Z398 122 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 H0YC42 278 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SYT7O43581 403 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 TLX2O43763 284 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SCGB2A1O75556 95 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPAG6O75602 509 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 RHOBTB1O94844 696 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 PTBP3O95758 552 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 GAS8O95995 478 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CXCL10P02778 98 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 NUDT17P0C025 328 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 THRBP10828 461 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 TOP1P11387 765 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 MYOGP15173 224 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 EZRP15311 586 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF18P17022 549 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 AOC1P19801 751 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 GLRA2P23416 452 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ACKR3P25106 362 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 PSMA5P28066 241 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 GPR183P32249 361 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SRP54P61011 504 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCNA1P78396 465 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 IRX1P78414 480 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 OVGP1Q12889 678 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 LCP2Q13094 533 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 GPR50Q13585 617 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SNX1Q13596 522 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CUL2Q13617 745 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 KARSQ15046 597 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CEBPEQ15744 281 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 C3AR1Q16581 482 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 MOGAT2Q3SYC2 334 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 FILIP1LQ4L180 1135 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 B3GLCTQ6Y288 498 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM64Q6YI46 380 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ARMCX2Q7L311 632 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 OTUD6AQ7L8S5 288 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 LRRTM1Q86UE6 522 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CTAGE6Q86UF2 777 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 AMZ2Q86W34 360 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF573Q86YE8 665 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 DND1Q8IYX4 353 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ELMOD1Q8N336 334 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CLEC1AQ8NC01 280 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCNYQ8ND76 341 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR52M1Q8NGK5 317 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 RNASE8Q8TDE3 154 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 GPR148Q8TDV2 347 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ULK4Q96C45 1275 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 DTD2Q96FN9 168 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ATXN7L3BQ96GX2 97 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CNOT6LQ96LI5 555 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 LINC00479Q96M42 142 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 NSMCE3Q96MG7 304 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 OVOL2Q9BRP0 275 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SYT11Q9BT88 431 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CARD6Q9BX69 1037 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 FGFBP2Q9BYJ0 223 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 LRRC2Q9BYS8 371 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCSER1Q9C0I3 900 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 POLR1EQ9GZS1 481 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 WWTR1Q9GZV5 400 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 TSPYL1Q9H0U9 437 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ATG10Q9H0Y0 220 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM245Q9H330 911 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF665Q9H7R5 613 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ECT2Q9H8V3 914 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 VIPAS39Q9H9C1 493 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAGEF1Q9HAY2 307 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 TM9SF3Q9HD45 589 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 FARSBQ9NSD9 589 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms