RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 C10orf90Q96M02 699 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 ADI1Q9BV57 179 aa20.76■□□□□ 0.91
PTPN13-205ENST00000502971 M0QX08 132 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 DPM1O60762 260 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 SDC3O75056 442 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TDGF1P13385 188 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 FEN1P39748 380 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ANXA11P50995 505 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 EPHA4P54764 986 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 OTUD3Q5T2D3 398 aaPredicted RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TNFAIP8L2Q6P589 184 aaPredicted RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 WDR5BQ86VZ2 330 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 HIPK1Q86Z02 1210 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 METTL25Q8N6Q8 603 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TMEM105Q8N8V8 129 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 OR56A1Q8NGH5 318 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TCTN2Q96GX1 697 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 FAM60AQ9NP50 221 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ZCCHC3Q9NUD5 404 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 UCKL1Q9NWZ5 548 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 USE1Q9NZ43 259 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 FBXO4Q9UKT5 387 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 PADI2Q9Y2J8 665 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ZNF451Q9Y4E5 1061 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 CSNK1G3Q9Y6M4 447 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 SPACA6W5XKT8 324 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ABCA7Q8IZY2 2146 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 CACNA1IQ9P0X4 2223 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 SLC9B1P1A6NJY1 282 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TMEM229AB2RXF0 380 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 C5orf58C9J3I9 102 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 E2F6O75461 281 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ALPLP05186 524 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TFPTP0C1Z6 253 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 DCTP40126 519 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 RPS26P62854 115 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 VLDLRP98155 873 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 SLC36A3Q495N2 470 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 C11orf74Q86VG3 221 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 DTWD2Q8NBA8 298 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 TAMM41Q96BW9 452 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 RDH12Q96NR8 316 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 RBM4BQ9BQ04 359 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 RBM4Q9BWF3 364 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 NPLQ9BXD5 320 aaPredicted RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 RAB33BQ9H082 229 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 IL21RQ9HBE5 538 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 IFT80Q9P2H3 777 aaPredicted RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ABCG2Q9UNQ0 655 aa20.75■□□□□ 0.91
PTPN13-205ENST00000502971 MRPS2Q9Y399 296 aaKnown RBP20.75■□□□□ 0.91
PTPN13-205ENST00000502971 ZDBF2Q9HCK1 2354 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 TMEM247A6NEH6 219 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 HMGN4O00479 90 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 SRPX2O60687 465 aaPredicted RBP20.74■□□□□ 0.91
PTPN13-205ENST00000502971 GALR3O60755 368 aaPredicted RBP20.74■□□□□ 0.91
PTPN13-205ENST00000502971 C8orf89P0DMQ9 161 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 FNTBP49356 437 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 IST1P53990 364 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 DUSP2Q05923 314 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 ZNF750Q32MQ0 723 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 IFI44LQ53G44 452 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 SHQ1Q6PI26 577 aaKnown RBP20.74■□□□□ 0.91
PTPN13-205ENST00000502971 MCATQ8IVS2 390 aaKnown RBP20.74■□□□□ 0.91
PTPN13-205ENST00000502971 DNAJC22Q8N4W6 341 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 DHRSXQ8N5I4 330 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 OR4K14Q8NGD5 310 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 SLC38A5Q8WUX1 472 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 C7orf34Q96L11 122 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 OSBPL10Q9BXB5 764 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 C3orf14Q9HBI5 128 aa20.74■□□□□ 0.91
PTPN13-205ENST00000502971 A0A1B0GVT2 93 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 RHPN2P1A8MT19 583 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 hCG_2039718K7EN88 272 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 EMC8O43402 210 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 FHP07954 510 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 MATN1P21941 496 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 KHKP50053 298 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 ARHGDIAP52565 204 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 ITGA1P56199 1179 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 PRR5P85299 388 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 TSSK4Q6SA08 328 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 MAP3K3Q99759 626 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 OR51I1Q9H343 314 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 PDP2Q9P2J9 529 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 GOLGA4Q13439 2230 aaKnown RBP20.73■□□□□ 0.91
PTPN13-205ENST00000502971 A0A1B0GTW7 788 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 H0YAE9 185 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 PDE9AO76083 593 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 BCHEP06276 602 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 CAPGP40121 348 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 PPP2R2BQ00005 443 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 GK3PQ14409 553 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 IQCCQ4KMZ1 466 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 C6orf132Q5T0Z8 1188 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 LYSMD4Q5XG99 296 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 SZRD1Q7Z422 152 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 MAML2Q8IZL2 1156 aaPredicted RBP20.73■□□□□ 0.91
PTPN13-205ENST00000502971 LRRC25Q8N386 305 aaPredicted RBP20.73■□□□□ 0.91
PTPN13-205ENST00000502971 ELP4Q96EB1 424 aa20.73■□□□□ 0.91
PTPN13-205ENST00000502971 TMEM19Q96HH6 336 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms